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Diffusion-weighted magnetic resonance imaging (dMRI) is widely used to assess the brain white matter. One of the most common computations in dMRI involves cross-subject tract-specific analysis, whereby dMRI-derived biomarkers are compared…

图像与视频处理 · 电气工程与系统科学 2023-07-12 Davood Karimi , Hamza Kebiri , Ali Gholipour

The state-of-the-art method for automatically segmenting white matter bundles in diffusion-weighted MRI is tractography in conjunction with streamline cluster selection. This process involves long chains of processing steps which are not…

计算机视觉与模式识别 · 计算机科学 2017-03-08 Jakob Wasserthal , Peter F. Neher , Fabian Isensee , Klaus H. Maier-Hein

The assessment of myocardial fiber disarray is of major interest for the study of the progression of myocardial disease. However, time-resolved imaging of the myocardial structure remains unavailable in clinical practice. In this study, we…

Diffusional kurtosis imaging (DKI) is a methodology for measuring the extent of non-Gaussian diffusion in biological tissue, which has shown great promise in clinical diagnosis, treatment planning and monitoring of many neurological…

图像与视频处理 · 电气工程与系统科学 2024-04-29 Megan E. Farquhar , Qianqian Yang , Viktor Vegh

This article introduces a new methodology for reconstructing the white matter fiber pathways of brain in diffusion MRI. Usually, the signal intensity values will be lesser in the direction of higher diffusivity. The proposed approach picks…

神经元与认知 · 定量生物学 2022-07-26 Ashishi Puri , Sanjeev Kumar

Diffusional Kurtosis Imaging (DKI) is a sensitive biomarker for microstructure in health and disease. However, DKI is not specific to any microstructural property since it may emerge from several different sources. Q-space trajectory…

医学物理 · 物理学 2020-03-06 Rafael Neto Henriques , Sune Nørhøj Jespersen , Noam Shemesh

In this paper we present a mathematical and numerical framework for a procedure of imaging anisotropic electrical conductivity tensor by integrating magneto-acoutic tomography with data acquired from diffusion tensor imaging.…

数值分析 · 数学 2017-11-22 Habib Ammari , Lingyun Qiu , Fadil Santosa , Wenlong Zhang

Registration of diffusion MRI tractography is an essential step for analyzing group similarities and variations in the brain's white matter (WM). Streamline-based registration approaches can leverage the 3D geometric information of fiber…

计算机视觉与模式识别 · 计算机科学 2025-07-15 Junyi Wang , Mubai Du , Ye Wu , Yijie Li , William M. Wells , Lauren J. O'Donnell , Fan Zhang

\hspace{2mm} Diffusion-weighted magnetic resonance imaging (dMRI) of the brain offers unique capabilities including noninvasive probing of tissue microstructure and structural connectivity. It is widely used for clinical assessment of…

图像与视频处理 · 电气工程与系统科学 2025-12-30 Davood Karimi , Simon K. Warfield

We propose a general methodology for calculating the self-diffusion tensor from molecular dynamics for a liquid with a liquid-gas or liquid-solid interface. The standard method used in bulk fluids, based on computing the mean square…

化学物理 · 物理学 2007-05-23 Pu Liu , Edward Harder , B. J. Berne

Diffusion anisotropy in diffusion tensor imaging (DTI) is commonly quantified with normalized diffusion anisotropy indices (DAIs). Most often, the fractional anisotropy (FA) is used, but several alternative DAIs have been introduced in…

Functional connectivity (FC) refers to the investigation of interactions between brain regions to understand integration of neural activity in several regions. FC is often estimated using functional magnetic resonance images (fMRI). There…

应用统计 · 统计学 2023-01-24 Nathan Tung , Jerome Sanes , Eli Upfal , Ani Eloyan

Images with abnormal brain anatomy produce problems for automatic segmentation techniques, and as a result poor ROI detection affects both quantitative measurements and visual assessment of perfusion data. This paper presents a new approach…

图像与视频处理 · 电气工程与系统科学 2019-02-19 Svitlana M Alkhimova

White matter segmentation methods from diffusion magnetic resonance imaging range from streamline clustering-based approaches to bundle mask delineation, but none have proposed a pediatric-specific approach. We hypothesize that a deep…

Diffusion-weighted magnetic resonance imaging (DW-MRI) is a critical imaging method for capturing and modeling tissue microarchitecture at a millimeter scale. A common practice to model the measured DW-MRI signal is via fiber orientation…

Purpose: Diffusion weighted MRI (dMRI) and its models of neural structure provide insight into human brain organization and variations in white matter. A recent study by McMaster, et al. showed that complex graph measures of the connectome,…

Statistical analysis of Diffusion Tensor Imaging (DTI) data requires a computational framework that is both numerically tractable (to account for the high dimensional nature of the data) and geometric (to account for the nonlinear nature of…

计算机视觉与模式识别 · 计算机科学 2012-10-11 Anne Collard , Silvère Bonnabel , Christophe Phillips , Rodolphe Sepulchre

Diffusion magnetic resonance imaging, a non-invasive tool to infer white matter fiber connections, produces a large number of streamlines containing a wealth of information on structural connectivity. The size of these tractography outputs…

计算机视觉与模式识别 · 计算机科学 2018-04-17 Kuldeep Kumar , Kaleem Siddiqi , Christian Desrosiers

Diffusion MRI (dMRI) is an advanced imaging technique characterizing tissue microstructure and white matter structural connectivity of the human brain. The demand for high-quality dMRI data is growing, driven by the need for better…

图像与视频处理 · 电气工程与系统科学 2024-08-26 Xi Zhu , Wei Zhang , Yijie Li , Lauren J. O'Donnell , Fan Zhang

Objective: Most deep neural network-based diffusion tensor imaging methods require the diffusion gradients' number and directions in the data to be reconstructed to match those in the training data. This work aims to develop and evaluate a…

图像与视频处理 · 电气工程与系统科学 2023-12-22 Zejun Wu , Jiechao Wang , Zunquan Chen , Qinqin Yang , Zhen Xing , Dairong Cao , Jianfeng Bao , Taishan Kang , Jianzhong Lin , Shuhui Cai , Zhong Chen , Congbo Cai