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The environment in which a population evolves can have a crucial impact on selection. We study evolutionary dynamics in finite populations of fixed size in a changing environment. The population dynamics are driven by birth and death…

种群与进化 · 定量生物学 2014-09-01 Peter Ashcroft , Philipp M Altrock , Tobias Galla

We discuss stochastic dynamics of populations of individuals playing games. Our models possess two evolutionarily stable strategies: an efficient one, where a population is in a state with the maximal payoff (fitness) and a risk-dominant…

种群与进化 · 定量生物学 2007-05-23 Jacek Miekisz

We study the evolutionary dynamics of games under environmental feedback using replicator equations for two interacting populations. One key feature is to consider jointly the co-evolution of the dynamic payoff matrices and the state of the…

种群与进化 · 定量生物学 2021-05-20 Lulu Gong , Jian Gao , Ming Cao

Studies on the genetics of adaptation typically neglect the possibility that a deleterious mutation might fix. Nonetheless, here we show that, in many regimes, the first substitution is most often deleterious, even when fitness is expected…

种群与进化 · 定量生物学 2015-03-10 David M. McCandlish , Charles L. Epstein , Joshua B. Plotkin

Identifying and quantifying the benefits of sex and recombination is a long standing problem in evolutionary theory. In particular, contradictory claims have been made about the existence of a benefit of recombination on high dimensional…

种群与进化 · 定量生物学 2014-11-11 Stefan Nowak , Johannes Neidhart , Ivan G. Szendro , Joachim Krug

In large populations, multiple beneficial mutations may be simultaneously spreading. In asexual populations, these mutations must either arise on the same background or compete against each other. In sexual populations, recombination can…

种群与进化 · 定量生物学 2013-12-19 D. B. Weissman , O. Hallatschek

The main topic of this thesis is the analysis of evolution equations reflecting issues in ecology and population dynamics. In mathematical modelling, the impact of environmental elements and the interaction between species is read into the…

偏微分方程分析 · 数学 2021-03-08 Elisa Affili

On rugged fitness landscapes where sign epistasis is common, adaptation can often involve either individually beneficial "uphill" mutations or more complex mutational trajectories involving fitness valleys or plateaus. The dynamics of the…

种群与进化 · 定量生物学 2015-10-06 Ian E. Ochs , Michael M. Desai

In contrast to the neutral population cycles of the deterministic mean-field Lotka--Volterra rate equations, including spatial structure and stochastic noise in models for predator-prey interactions yields complex spatio-temporal structures…

种群与进化 · 定量生物学 2013-10-16 Ulrich Dobramysl , Uwe C. Tauber

Food-web perturbations stemming from climate change, overexploitation, invasive species, and habitat degradation often cause an initial loss of species that results in a cascade of secondary extinctions, posing considerable challenges to…

种群与进化 · 定量生物学 2011-03-10 Sagar Sahasrabudhe , Adilson E. Motter

The entanglement of population dynamics, evolution, and adaptive radiation for species competing for resources is studied. For resource harvesting, we modify the model used in Ref. Phys. Rev. Lett. 118 048103 and introduce new resource…

种群与进化 · 定量生物学 2023-10-03 Sergei V. Koniakhin

Evolution occurs in populations of reproducing individuals. The structure of a biological population affects which traits evolve. Understanding evolutionary game dynamics in structured populations is difficult. Precise results have been…

种群与进化 · 定量生物学 2017-08-16 Benjamin Allen , Gabor Lippner , Yu-Ting Chen , Babak Fotouhi , Naghmeh Momeni , Martin A. Nowak , Shing-Tung Yau

An elastic spring network is an example of evolvable matter. It can be pruned to couple separated pairs of nodes so that when a strain is applied to one of them, the other responds either in-phase or out-of-phase. This produces two pruned…

软凝聚态物质 · 物理学 2026-02-10 Samar Alqatari , Sidney Nagel

It is well-known that population structure is a catalyst for the evolution of cooperation since individuals can reciprocate with their neighbors through local interactions defined by network structures. Previous research typically relies on…

物理与社会 · 物理学 2021-12-16 Anzhi Sheng , Aming Li , Long Wang

Identifying drivers of complex traits from the noisy signals of genetic variation obtained from high throughput genome sequencing technologies is a central challenge faced by human geneticists today. We hypothesize that the variants…

种群与进化 · 定量生物学 2013-06-18 M. Cyrus Maher , Lawrence H. Uricchio , Dara G. Torgerson , Ryan D. Hernandez

Since steep declines in a population's size also typically alter its composition, population bottlenecks are considered highly important for evolution. However, despite such significance, the mechanisms governing the impact of a given…

种群与进化 · 定量生物学 2022-06-28 Emanuele Crosato , Jeffrey N. Philippson , Shashi Thutupalli , Richard G. Morris

We study a continuous-time dynamical system that models the evolving distribution of genotypes in an infinite population where genomes may have infinitely many or even a continuum of loci, mutations accumulate along lineages without…

种群与进化 · 定量生物学 2009-02-03 Aubrey Clayton , Steven N. Evans

Genetic variation in a population can sometimes arise so fast as to modify ecosystem dynamics. Such phenomena have been observed in natural predator-prey systems, and characterized in the laboratory as showing unusual phase relationships in…

种群与进化 · 定量生物学 2025-03-25 Hong-Yan Shih , Nigel Goldenfeld

When mutation rates are low, natural selection remains effective, and increasing the mutation rate can give rise to an increase in adaptation rate. When mutation rates are high to begin with, however, increasing the mutation rate may have a…

种群与进化 · 定量生物学 2012-11-06 Philip Gerrish , Alexandre Colato , Paul Sniegowski

Cooperation is a difficult proposition in the face of Darwinian selection. Those that defect have an evolutionary advantage over cooperators who should therefore die out. However, spatial structure enables cooperators to survive through the…

物理与社会 · 物理学 2018-02-02 Attila Szolnoki , Matjaz Perc