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In our original article (Phys. Chem. Chem. Phys., 2012, 14, 60446053) a convergence problem resulted in an averaging error in computing the entropy from a set of Wang-Landau Monte-Carlo simulations. Here we report corrected results for the…

软凝聚态物质 · 物理学 2021-04-13 Bart Vorselaars , Štěpán Růžička , David Quigley , Michael P. Allen

This work introduces a methodology for the statistical mechanical analysis of polymeric chains under tension controlled by optical or magnetic tweezers at thermal equilibrium with an embedding fluid medium. The response of single bonds…

软凝聚态物质 · 物理学 2020-02-26 Aaron C. Meyer , Yahya Öz , Norman Gundlach , Michael Karbach , Ping Lu , Gerhard Müller

We study the unfolding of a single polymer chain due to an external force. We use a simplified model which allows to perform all calculations in closed form without assuming a Boltzmann-Gibbs form for the equilibrium distribution.…

统计力学 · 物理学 2009-11-13 Erik Van der Straeten , Jan Naudts

Using Langevin dynamics complemented by Wang-Landau Monte Carlo simulations, we study the phase behavior of single and multiple semiflexible polymer chains in solution under poor-solvent conditions. In the case of a single chain, we obtain…

We generalize a recently investigated lattice model of semiflexible polymers formed under equilibrium polymerization in a solution and conduct a comprehensive investigation of its melting properties. The model is characterized by six…

凝聚态物理 · 物理学 2007-05-23 Sagar S. Rane , P. D. Gujrati

We consider a stiff polymer chain in poor solvent and apply a force at one end of the chain. We find that by varying the stiffness parameter, polymer undergoes a transition from the globule state to the folded like state. The conformation…

软凝聚态物质 · 物理学 2015-05-13 Sanjay Kumar , Debaprasad Giri

We present an analysis of a partially directed walk model of a polymer which at one end is tethered to a sticky surface and at the other end is subjected to a pulling force at fixed angle away from the point of tethering. Using the kernel…

软凝聚态物质 · 物理学 2015-05-19 Judy-anne Osborn , Thomas Prellberg

The microscopic model of semi-crystalline polymer in high-elastic state is proposed. The model is based on the assumption that, below the melting temperature, the semi-crystalline polymer comprises crystal nuclei connected by stretched…

软凝聚态物质 · 物理学 2013-06-20 V. V. Atrazhev , S. F. Burlatsky , D. V. Dmitriev , V. I. Sultanov

We study the conformations of polymer chains in a poor solvent, with and without bending rigidity, by means of a simple statistical mechanics model. This model can be exactly solved for chains of length up to N=55 using exact enumeration…

统计力学 · 物理学 2007-11-26 Anthony J. Guttmann , Jesper L. Jacobsen , Iwan Jensen , Sanjay Kumar

We present an extremely simplified model of multiple-domains polymer stretching in an atomic force microscopy experiment. We portray each module as a binary set of contacts and decompose the system energy into a harmonic term (the…

生物大分子 · 定量生物学 2008-01-20 Carlo Guardiani , Franco Bagnoli

We show that when a self-avoiding polymer chain is pulled off a sticky surface by force applied to the end segment, it undergoes a first-order thermodynamic phase transition albeit without phase coexistence. This unusual feature is…

软凝聚态物质 · 物理学 2009-09-15 A. Milchev , V. G. Rostiashvili , S. Bhattacharya , T. A. Vilgis

We investigate the finite-temperature phase diagram of polar molecules confined in a quasi-two-dimensional geometry by a harmonic potential along the polarization axis. We employ Quantum Monte Carlo simulations to explore the strongly…

量子气体 · 物理学 2026-05-19 Vinicius Zampronio , Matteo Ciardi , Fabio Cinti

In earlier work we provided the first evidence that the collapse, or coil-globule, transition of an isolated polymer in solution can be seen in a four-dimensional model. Here we investigate, via Monte Carlo simulations, the canonical…

统计力学 · 物理学 2009-10-31 T. Prellberg , A. L. Owczarek

By simulating the first order globule-crystal transition of a flexible homopolymer chain, both by collision dynamics and Monte Carlo with non-kinetic moves, we show that the effective and the thermodynamic transition temperatures are…

软凝聚态物质 · 物理学 2017-08-23 S. Ruzicka , D. Quigley , M. P. Allen

We present a phase-field crystal (PFC) model for solidification that accounts for thermal transport and a temperature-dependent lattice parameter. Elasticity effects are characterized through the continuous elastic field computed from the…

材料科学 · 物理学 2023-01-26 Maik Punke , Steven M. Wise , Axel Voigt , Marco Salvalaglio

A polymer folding model on the square lattice is constructed with attractive contact interactions of strength 1/c^2, 0<c<1. The corresponding model on a dynamical random lattice, with freely fluctuating co-ordination number at each vertex,…

凝聚态物理 · 物理学 2016-08-31 S. Dalley

We study the thermodynamic behavior of a simple off-lattice model for protein folding. The model is two-dimensional and has two different ``amino acids''. Using numerical simulations of all chains containing eight or ten monomers, we…

chem-ph · 物理学 2009-10-28 Anders Irbäck , Frank Potthast

We have studied the structure and free energy landscape of a semi-flexible lattice-polymer in the presence of a surface. At low temperatures coexistence of two-dimensional integer-folded crystals is observed. As the temperature is increased…

软凝聚态物质 · 物理学 2007-05-23 Jonathan Doye , Daan Frenkel

It has been revealed by mean-field theories and computer simulations that the nature of the collapse transition of a polymer is influenced by its bending stiffness $\epsilon_{\rm b}$. In two dimensions, a recent analytical work demonstrated…

软凝聚态物质 · 物理学 2009-11-13 Jie Zhou , Zhong-Can Ou-Yang , Haijun Zhou

A statistical mechanical description of flexible and semi-flexible polymer chains in a poor solvent is developed in the constant force and constant distance ensembles. We predict the existence of many intermediate states at low temperatures…

软凝聚态物质 · 物理学 2007-05-23 Sanjay Kumar , Iwan Jensen , Jesper L. Jacobsen , Anthony J. Guttmann
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