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A comprehensive, semi-quantitative model for the thermodynamics of hydrophobic solvation is presented. The model is based on a very simple premise suggested by the scaled particle theory and treats both solute and solvent molecules as hard…

生物物理 · 物理学 2007-05-23 Hong Qian

Using molecular dynamics simulations, we study a liquid model which consists of particles interacting via a spherically-symmetric two-scale Jagla ramp potential with both repulsive and attractive ramps. The Jagla potential displays…

软凝聚态物质 · 物理学 2009-11-11 Limei Xu , Sergey V. Buldyrev , C. Austen Angell , H. Eugene Stanley

Jagla ramp particles, interacting through a ramp potential with two characteristic length scales, are known to show in their bulk phase thermodynamic and dynamic anomalies, similar to what is found in water. Jagla particles also exhibit a…

软凝聚态物质 · 物理学 2015-05-19 Dario Corradini , Sergey V. Buldyrev , Paola Gallo , H. Eugene Stanley

Using molecular dynamics simulations, we study a spherically-symmetric ``two-scale'' Jagla potential with both repulsive and attractive ramps. This potential displays a liquid-liquid phase transition with a positively sloped coexistence…

软凝聚态物质 · 物理学 2009-11-11 Limei Xu , Isaac Ehrenberg , Sergey V. Buldyrev , H. Eugene Stanley

The thermodynamics of hydration changes gradually from entropic for small solutes to enthalpic for large ones. The small-to-large crossover lengthscale of hydrophobic hydration depends on the thermodynamic conditions of the solvent such as…

软凝聚态物质 · 物理学 2015-06-15 Yuri S. Djikaev , Eli Ruckenstein

The increase of aqueous solubility of nonpolar compounds upon cooling and the cold denaturation of proteins are established experimental facts. Both phenomena have been hypothesized to be related to restructuring of the hydrogen bond…

软凝聚态物质 · 物理学 2007-05-23 Sergey V. Buldyrev , Pradeep Kumar , H. Eugene Stanley

We examine five different popular rigid water models (SPC, SPCE, TIP3P, TIP4P and TIP5P) using MD simulations in order to investigate the hydrophobic hydration and interaction of apolar Lennard-Jones solutes as a function of temperature in…

软凝聚态物质 · 物理学 2009-09-29 Dietmar Paschek

We present results from extensive molecular dynamics simulations of collapse transitions of hydrophobic polymers in explicit water focused on understanding effects of lengthscale of the hydrophobic surface and of attractive interactions on…

统计力学 · 物理学 2007-05-23 Manoj V. Athawale , Gaurav Goel , Tuhin Ghosh , Thomas M. Truskett , Shekhar Garde

Hydrophobic interactions are central to biological self-assembly and soft matter organization, yet their microscopic origins remain debated. A key hallmark is the strengthening of attraction between hydrophobic solutes with increasing…

软凝聚态物质 · 物理学 2025-09-25 Nigel B. Wilding , Francesco Turci

Methanol is an amphiphilic solute whose aqueous solutions exhibit distinctive physical properties. The volume change upon mixing, for example, is negative across the entire composition range, indicating strong association. We explore the…

软凝聚态物质 · 物理学 2015-06-03 Zhiqiang Su , Sergey V. Buldyrev , Pablo G. Debenedetti , Peter J. Rossky , H. Eugene Stanley

A high level polarizable force field is used to study the temperature dependence of hydrophobic hydration of small-sized molecules from computer simulations. Molecular dynamics (MD) simulations of liquid water at various temperatures form…

生物物理 · 物理学 2007-11-27 R. Mahajan , D. Krazmueller , U. H. E. Hansmann , J. Volkert , S. Hoefinger

On a basis of a two-length scale description of hydrophobic interactions we develop a continuous self-consistent theory of solute-water interactions which allows to determine a hydrophobic layer of a solute molecules of any geometry with…

软凝聚态物质 · 物理学 2007-05-23 G. Sitnikov , S. Nechaev , M. Taran , A. Muryshev

Hydration of hydrophobic solutes in water is the cause of different phenomena, including the hydrophobic heat-capacity anomaly, which are not yet fully understood. Because of its topicality, there has recently been growing interest in the…

软凝聚态物质 · 物理学 2009-11-10 Susanne Moelbert , Paolo De Los Rios

We present a study using molecular dynamics simulations based on the Fermi-Jagla potential model, which is the continuous version of the mono-atomic core-softened Jagla model [J. Y. Abraham, S. V. Buldyrev, and N. Giovambattista, J. Phys.…

软凝聚态物质 · 物理学 2018-03-09 Saki Higuchi , Daiki Kato , Daisuke Awaji , Kang Kim

The hydrophobic effect stabilizes the native structure of proteins by minimizing the unfavourable interactions between hydrophobic residues and water through the formation of a hydrophobic core. Here we include the entropic and enthalpic…

软凝聚态物质 · 物理学 2016-03-23 Erik van Dijk , Patrick Varilly , Tuomas Knowles , Daan Frenkel , Sanne Abeln

The solvation of charged, nanometer-sized spherical solutes in water, and the effective, solvent-induced force between two such solutes are investigated by constant temperature and pressure Molecular Dynamics simulations of model solutes…

软凝聚态物质 · 物理学 2009-11-10 J. Dzubiella , J. -P. Hansen

The origin of both weak temperature dependence and packing fraction dependence of $T^{1/4}\eta^{3/2}$ in the thermal conductivity of the simple Lennard-Jones (LJ) liquid is explored. In order to discuss the relative contributions from…

统计力学 · 物理学 2014-04-10 Yoshiki Ishii , Keisuke Sato , Mathieu Salanne , Paul A. Madden , Norikazu Ohtori

We address the question of the dependence of the fragility of glass forming supercooled liquids on the softness of an interacting potential by performing numerical simulation of a binary mixture of soft spheres with different power n of the…

软凝聚态物质 · 物理学 2007-05-23 Cristiano De Michele , Francesco Sciortino , Antonio Coniglio

Hydrophobic hydration plays a crucial role in self-assembly processes over multiple length-scales, but the extrapolation of molecular-scale models to larger length-scale hydration phenomena is sometimes not warranted. Scaled-particle…

生物物理 · 物理学 2007-05-23 Henry S. Ashbaugh , Lawrence R. Pratt

Using discrete molecular dynamics simulations we study the relation between the thermodynamic and diffusive behaviors of a primitive model of aqueous solutions of hydrophobic solutes consisting of hard spheres in the Jagla particles…

软凝聚态物质 · 物理学 2015-06-04 D. Corradini , P. Gallo , S. V. Buldyrev , H. E. Stanley
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