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Discrete data such as counts of microbiome taxa resulting from next-generation sequencing are routinely encountered in bioinformatics. Taxa count data in microbiome studies are typically high-dimensional, over-dispersed, and can only reveal…

统计方法学 · 统计学 2022-06-23 Yuan Fang , Sanjeena Subedi

We consider the use of Bayesian information criteria for selection of the graph underlying an Ising model. In an Ising model, the full conditional distributions of each variable form logistic regression models, and variable selection…

统计理论 · 数学 2015-03-09 Rina Foygel Barber , Mathias Drton

Until recently, the use of Bayesian inference in population genetics was limited to a few cases because for many realistic population genetic models the likelihood function cannot be calculated analytically . The situation changed with the…

统计方法学 · 统计学 2009-01-16 Christoph Leuenberger Daniel Wegmann Laurent Excoffier

Bayesian inference typically relies on specifying a parametric model that approximates the data-generating process. However, misspecified models can yield poor convergence rates and unreliable posterior calibration. Bayesian empirical…

统计方法学 · 统计学 2025-10-27 Kenyon Ng , Weichang Yu , Howard D. Bondell

Parameter inference is a fundamental problem in data-driven modeling. Given observed data that is believed to be a realization of some parameterized model, the aim is to find parameter values that are able to explain the observed data. In…

数据结构与算法 · 计算机科学 2016-04-20 Carlo Albert , Simone Ulzega , Ruedi Stoop

Aims. We aim at creating a Bayesian model to infer the coefficients of PL or PLZ relations that propagates uncertainties in the observables in a rigorous and well founded way. Methods. We propose a directed acyclic graph to encode the…

天体物理仪器与方法 · 物理学 2019-03-27 H. E. Delgado , L. M. Sarro , G. Clementini , T. Muraveva , A. Garofalo

In variational inference, the benefits of Bayesian models rely on accurately capturing the true posterior distribution. We propose using neural samplers that specify implicit distributions, which are well-suited for approximating complex…

机器学习 · 计算机科学 2023-11-10 Anshuk Uppal , Kristoffer Stensbo-Smidt , Wouter Boomsma , Jes Frellsen

The effects of treatments may differ between persons with different characteristics. Addressing such treatment heterogeneity is crucial to investigate whether patients with specific characteristics are likely to benefit from a new…

统计方法学 · 统计学 2024-03-29 Xynthia Kavelaars , Joris Mulder , Maurits Kaptein

A novel sequential inferential method for Bayesian dynamic generalised linear models is presented, addressing both univariate and multivariate $k$-parametric exponential families. It efficiently handles diverse responses, including…

统计方法学 · 统计学 2025-01-15 Mariane Branco Alves , Helio S. Migon , Silvaneo V. Santos , Raíra Marotta

Spatial generalized linear mixed models (SGLMMs) are popular and flexible models for non-Gaussian spatial data. They are useful for spatial interpolations as well as for fitting regression models that account for spatial dependence, and are…

统计方法学 · 统计学 2021-10-26 Yawen Guan , Murali Haran

Bayesian estimation is increasingly popular for performing model based inference to support policymaking. These data are often collected from surveys under informative sampling designs where subject inclusion probabilities are designed to…

统计方法学 · 统计学 2018-07-13 Luis G. Leon-Novelo , Terrance D. Savitsky

Approximate Bayesian inference on the basis of summary statistics is well-suited to complex problems for which the likelihood is either mathematically or computationally intractable. However the methods that use rejection suffer from the…

统计计算 · 统计学 2010-05-04 M. G. B. Blum , O. Francois

In Bayesian theory, calculating a posterior probability distribution is highly important but usually difficult. Therefore, some methods have been put forward to deal with such problem, among which, the most popular one is the asymptotic…

统计方法学 · 统计学 2012-07-20 Zai-Ying Zhou

Exponential random graph models are an important tool in the statistical analysis of data. However, Bayesian parameter estimation for these models is extremely challenging, since evaluation of the posterior distribution typically involves…

统计计算 · 统计学 2017-05-05 Lampros Bouranis , Nial Friel , Florian Maire

Bayesian graphical modeling provides an appealing way to obtain uncertainty estimates when inferring network structures, and much recent progress has been made for Gaussian models. These models have been used extensively in applications to…

统计方法学 · 统计学 2012-07-06 Michael Finegold , Mathias Drton

We propose a novel approach to perform approximate Bayesian inference in complex models such as Bayesian neural networks. The approach is more scalable to large data than Markov Chain Monte Carlo, it embraces more expressive models than…

机器学习 · 统计学 2022-09-07 Joel Janek Dabrowski , Daniel Edward Pagendam

Bounded continuous responses -- such as proportions -- arise frequently in diverse scientific fields including climatology, biostatistics, and finance. Beta regression is a widely adopted framework for modeling such data, due to the…

统计方法学 · 统计学 2025-05-29 The Tien Mai

Background: Continuous traits evolution of a group of taxa that are correlated through a phylogenetic tree is commonly modelled using parametric stochastic differential equations to represent deterministic change of trait through time,…

种群与进化 · 定量生物学 2026-04-03 Bayu Brahmantio , Krzysztof Bartoszek , Etka Yapar

We introduce a Bayesian approach for multivariate spatio-temporal prediction for high-dimensional count-valued data. Our primary interest is when there are possibly millions of data points referenced over different variables, geographic…

统计方法学 · 统计学 2015-12-24 Jonathan R. Bradley , Scott H. Holan , Christopher K. Wikle

A new methodology for model determination in decomposable graphical Gaussian models is developed. The Bayesian paradigm is used and, for each given graph, a hyper inverse Wishart prior distribution on the covariance matrix is considered.…

统计计算 · 统计学 2015-03-13 Sophie Donnet , Jean-Michel Marin