相关论文: acc-Motif Detection Tool

This paper introduces a novel graph-analytic approach for detecting anomalies in network flow data called GraphPrints. Building on foundational network-mining techniques, our method represents time slices of traffic as a graph, then counts…

Seminal research in the field of graph neural networks (GNNs) has revealed a direct correspondence between the expressive capabilities of GNNs and the $k$-dimensional Weisfeiler-Leman ($k$WL) test, a widely-recognized method for verifying…

A deluge of new data on social, technological and biological networked systems suggests that a large number of interactions among system units are not limited to pairs, but rather involve a higher number of nodes. To properly encode such…

Many real world networks are considered temporal networks, in which the chronological ordering of the edges has importance to the meaning of the data. Performing temporal subgraph matching on such graphs requires the edges in the subgraphs…

Counting small subgraphs, referred to as motifs, in large graphs is a fundamental task in graph analysis, extensively studied across various contexts and computational models. In the sublinear-time regime, the relaxed problem of approximate…

We consider the problem of sampling and approximately counting an arbitrary given motif $H$ in a graph $G$, where access to $G$ is given via queries: degree, neighbor, and pair, as well as uniform edge sample queries. Previous algorithms…

We consider the problem of counting the copies of a length-$k$ pattern $\sigma$ in a sequence $f \colon [n] \to \mathbb{R}$, where a copy is a subset of indices $i_1 < \ldots < i_k \in [n]$ such that $f(i_j) < f(i_\ell)$ if and only if…

We consider the problem of detecting a cycle in a directed graph that grows by arc insertions, and the related problems of maintaining a topological order and the strong components of such a graph. For these problems, we give two…

The structure of complex networks can be characterized by counting and analyzing network motifs. Motifs are small subgraphs that occur repeatedly in a network, such as triangles or chains. Recent work has generalized motifs to temporal and…

The problems studied in this paper originate from Graph Motif, a problem introduced in 2006 in the context of biological networks. Informally speaking, it consists in deciding if a multiset of colors occurs in a connected subgraph of a…

For an arbitrary, fixed graph (pattern graph), we study the algorithmic complexity of counting homomorphisms, subgraph isomorphisms, and induced subgraph isomorphisms from the pattern graph to $n$-vertex, $d$-degenerate graphs as input.…

Motif discovery is one of the most challenging problems in bioinformatics today. DNA sequence motifs are becoming increasingly important in analysis of gene regulation. Motifs are short, recurring patterns in DNA that have a biological…

Network sampling is an indispensable tool for understanding features of large complex networks where it is practically impossible to search over the entire graph. In this paper, we develop a framework for statistical inference for counting…

Motif discovery is a fundamental step in data mining tasks for time-series data such as clustering, classification and anomaly detection. Even though many papers have addressed the problem of how to find motifs in time-series by proposing…

We study a family of pattern-detection problems in vertex-colored temporal graphs. In particular, given a vertex-colored temporal graph and a multiset of colors as a query, we search for temporal paths in the graph that contain the colors…

Time Series Motif Discovery (TSMD) refers to the task of identifying patterns that occur multiple times (possibly with minor variations) in a time series. All existing methods for TSMD have one or more of the following limitations: they…

Next-generation sequencing technology enables the identification of thousands of gene regulatory sequences in many cell types and organisms. We consider the problem of testing if two such sequences differ in their number of binding site…

Time-series motifs are representative subsequences that occur frequently in a time series; a motif set is the set of subsequences deemed to be instances of a given motif. We focus on finding motif sets. Our motivation is to detect motif…

Graph pattern matching algorithms to handle million-scale dynamic graphs are widely used in many applications such as social network analytics and suspicious transaction detections from financial networks. On the other hand, the computation…

We consider the fundamental problems of determining the rooted and global edge and vertex connectivities (and computing the corresponding cuts) in directed graphs. For rooted (and hence also global) edge connectivity with small integer…