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Multiple sclerosis (MS) is an inflammatory demyelinating disease of the central nervous system (CNS) that results in focal injury to the grey and white matter. The presence of white matter lesions biases morphometric analyses such as…

计算机视觉与模式识别 · 计算机科学 2019-09-09 Hao Xiong , Chaoyue Wang , Dacheng Tao , Michael Barnett , Chenyu Wang

The aim of this paper is to further develop mathematical models for bleb formation in cells, including cell-membrane interactions with linker proteins. This leads to nonlinear reaction-diffusion equations on a surface coupled to fluid…

偏微分方程分析 · 数学 2019-12-20 Philipp Werner , Martin Burger , Jan-Frederik Pietschmann

The internal and external mechanical environment plays an important role in tumorogenesis. As a proxy of an avascular early state tumor, we use multicellular spheroids, a composite material made of cells, extracellular matrix and permeating…

In this paper, we present a probabilistic analysis of a dynamical particle model for the self-adaptive immune response to cancer, as proposed by the first author in a previous work. The model is motivated by the interplay between immune…

概率论 · 数学 2025-08-06 Christian Kuehn , Quirin Vogel

Optogenetics is a new tool to study neuronal circuits that have been genetically modified to allow stimulation by flashes of light. We study recordings from single neurons within neural circuits under optogenetic stimulation. The data from…

统计方法学 · 统计学 2016-12-23 Xi Luo , Steven Gee , Vikaas S. Sohal , Dylan S. Small

Subclinical leaflet thrombosis (SLT) is a potentially serious complication of aortic valve replacement with a bioprosthetic valve in which blood clots form on the replacement valve. SLT is associated with increased risk of transient…

In this paper we study a nonlinear reaction-diffusion system which models an infectious disease caused by bacteria such as those for cholera. One of the significant features in this model is that a certain portion of the recovered human…

偏微分方程分析 · 数学 2022-02-01 Hong-Ming Yin , Jun Zou

Immunotherapy has recently shown important clinical successes in a substantial number of oncology indications. Additionally, the tumor somatic mutation load has been shown to associate with response to these therapeutic agents, and specific…

基因组学 · 定量生物学 2019-06-19 Ehsan Ebrahimzadeh , Maggie Engler , David Tse , Razvan Cristescu , Aslan Tchamkerten

We study the nonequilibrium phase transitions from the absorbing phase to the active phase for the model of disease spreading (Susceptible-Infected-Refractory-Susceptible (SIRS)) on a regular one dimensional lattice. In this model,…

统计力学 · 物理学 2023-08-15 M. Ali Saif

When the body gets infected by a pathogen or receives a vaccine dose, the immune system develops pathogen-specific immunity. Induced immunity decays in time and years after recovery/vaccination the host might become susceptible again.…

种群与进化 · 定量生物学 2015-01-15 Maria Vittoria Barbarossa , Gergely Röst

The strategic induction of cell death serves as a crucial immune defense mechanism for the eradication of pathogenic infections within host cells. Investigating the molecular mechanisms underlying immunogenic cell pathways has significantly…

分子网络 · 定量生物学 2024-02-08 Chuang Li , Yichen Wei , Chao Qin , Shifan Chen , Xiaolong Shao

Calcification and mineralization are fundamental physiological processes, yet the mechanisms of calcification, in trabecular bone and in calcified lesions in atherosclerotic calcification, are unclear. Recently, it was shown in in vitro…

斑图形成与孤子 · 物理学 2012-02-08 A. Yochelis , Y. Tintut , L. L. Demer , A. Garfinkel

We show theoretically that an intense femtosecond optical pulse incident normally on a metal surface tends to decay into a pair of counter-propagating surface plasmon-polaritons (SPPs). The interference field heats the medium periodically,…

光学 · 物理学 2022-09-14 Ivan Oladyshkin

An interesting inference drawn by some Covid-19 epidemiological models is that there exists a proportion of the population who are not susceptible to infection -- even at the start of the current pandemic. This paper introduces a model of…

定量方法 · 定量生物学 2020-09-18 Thomas Parr , Anjali Bhat , Peter Zeidman , Aimee Goel , Alexander J. Billig , Rosalyn Moran , Karl J. Friston

Immune events such as infection, vaccination, and a combination of the two result in distinct time-dependent antibody responses in affected individuals. These responses and event prevalences combine non-trivially to govern antibody levels…

种群与进化 · 定量生物学 2024-04-16 Prajakta Bedekar , Rayanne A. Luke , Anthony J. Kearsley

Infections depend on interactions between pathogen and host proteins, but comprehensively mapping these interactions is challenging and labor intensive. Many biological networks have hierarchical, scale-free structure, so we developed a…

分子网络 · 定量生物学 2025-11-19 Xiaoqiong Xia , Cesar de la Fuente-Nunez

The mechanisms underlying the formation of post-infection sequelae are complex and remain controversial. This hypothesis integrates Bystryn's antibody feedback phenomenon and Imbiakha's immune cost theory, proposing for the first time a…

定量方法 · 定量生物学 2025-06-10 Shi Qiru

Phosphorelays are a class of signaling mechanisms used by cells to respond to changes in their environment. Phosphorelays (of which two-component systems constitute a special case) are particularly abundant in prokaryotes and have been…

分子网络 · 定量生物学 2011-09-26 Michael Knudsen , Elisenda Feliu , Carsten Wiuf

A hallmark of the adaptive immune response is the proliferation of pathogen-specific lymphocytes that leave in their wake a long lived population of cells that provide lasting immunity. A subject of ongoing investigation is when during an…

细胞行为 · 定量生物学 2020-06-04 Alexander S. Miles , Philip D. Hodgkin , Ken R. Duffy

Emergent pattern formation in self-propelled particle (SPP) systems is extensively studied because it addresses a range of swarming phenomena which occur without leadership. Here we present a dynamic SPP model in which a sensory blind zone…

种群与进化 · 定量生物学 2008-07-23 Jonathan P. Newman , Hiroki Sayama