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The conformational change of biological macromolecule is investigated from the point of quantum transition. A quantum theory on protein folding is proposed. Compared with other dynamical variables such as mobile electrons, chemical bonds…

生物大分子 · 定量生物学 2013-08-06 LiaoFu Luo

Under physiological conditions, ballistic long-range transfer of electronic excitations in molecular aggregates is generally expected to be suppressed by noise and dissipative processes. Hence, quantum phenomena are not considered to be…

介观与纳米尺度物理 · 物理学 2021-10-13 Andrea Mattioni , Felipe Caycedo-Soler , Susana F. Huelga , Martin B. Plenio

Non-Markovian and non-equilibrium phonon effects are believed to be key ingredients in the energy transfer in photosynthetic complexes, especially in complexes which exhibit a regime of intermediate exciton-phonon coupling. In this work, we…

量子物理 · 物理学 2011-07-08 Patrick Rebentrost , Alán Aspuru-Guzik

Molecular overtone transitions provide optical frequency transitions sensitive to variation in the proton-to-electron mass ratio ($\mu\equiv m_p/m_e$). However, robust molecular state preparation presents a challenge critical for achieving…

Fermionic quantum processors are a promising platform for quantum simulation of correlated fermionic matter. In this work, we study a hardware-efficient protocol for measuring complex expectation values of the time-evolution operator,…

We assess how quantum-mechanical effects associated with high-frequency chromophore vibrations influence excitation energy transfer in biological light-harvesting complexes. We begin with a mixed quantum-classical theory that combines a…

化学物理 · 物理学 2025-01-07 Johan E. Runeson , David E. Manolopoulos

Addressing the role of quantum coherence in the interplay between the different matter constituents (electrons, phonons and spin) is a critical step towards understanding transition metal oxides and design complex materials with new…

We examine computational techniques and methodologies currently in use to explore electronic excitation energy transfer in the context of light-harvesting complexes in photosynthetic antenna systems, and comment on some new insights into…

化学物理 · 物理学 2012-07-05 Leonardo A. Pachon , Paul Brumer

The mapping approach addresses the mismatch between the continuous nuclear phase space and discrete electronic states by creating an extended, fully continuous phase space using a set of harmonic oscillators to encode the populations and…

化学物理 · 物理学 2019-09-30 Maximilian A. C. Saller , Aaron Kelly , Jeremy O. Richardson

Multiple time scale molecular dynamics enhances computational efficiency by updating slow motions less frequently than fast motions. However, in practice the largest outer time step possible is limited not by the physical forces but by…

统计力学 · 物理学 2011-01-13 Joseph A. Morrone , Thomas E. Markland , Michele Ceriotti , B. J. Berne

We develop a hierarchical equations of motion (HEOM) approach to compute real-time single-particle correlation functions and thermodynamic properties of the Holstein model at finite temperature. We exploit the conservation of the total…

强关联电子 · 物理学 2022-02-24 Veljko Janković , Nenad Vukmirović

This paper introduces a novel ansatz-based technique for solution of the Hubbard model over two length scales. Short range correlations are treated exactly using a dynamical cluster approximation QMC simulation, while longer-length-scale…

强关联电子 · 物理学 2009-11-10 J. P. Hague , Mark Jarrell , T. C. Schulthess

We present a computational protocol, based on density matrix perturbation theory, to obtain non-adiabatic, frequency-dependent electron-phonon self-energies for molecules and solids. Our approach enables the evaluation of electron-phonon…

材料科学 · 物理学 2023-05-09 Han Yang , Marco Govoni , Arpan Kundu , Giulia Galli

We propose a general extended coherent state approach to the qubit (or fermion) and multi-mode boson coupling systems. The application to the spin-boson model with the discretization of a bosonic bath with arbitrary continuous spectral…

量子气体 · 物理学 2015-05-14 Yu-Yu Zhang , Qing-Hu Chen , Ke-Lin Wang

We present a novel representation of coupled matter-photon systems that allows the application of many-body methods developed for purely fermionic systems. We do so by rewriting the original coupled light-matter problem in a…

量子物理 · 物理学 2019-12-24 S. E. B. Nielsen , C. Schäfer , M. Ruggenthaler , A. Rubio

The electronic excitation population and coherence dynamics in the chromophores of the photosynthetic light harvesting complex 2 (LH2) B850 ring from purple bacteria (Rhodopseudomonas acidophila) have been studied theoretically at both…

化学物理 · 物理学 2012-08-29 Shu-Hao Yeh , Jing Zhu , Sabre Kais

Near-unity energy transfer efficiency has been widely observed in natural photosynthetic complexes. This phenomenon has attracted broad interest from different fields, such as physics, biology, chemistry and material science, as it may…

The phase transition patterns displayed by a model of two coupled complex scalar fields are studied at finite temperature and chemical potential. Possible phenomena like symmetry persistence and inverse symmetry breaking at high…

高能物理 - 唯象学 · 物理学 2023-02-24 Manuella C. Silva , Rudnei O. Ramos , Ricardo L. S. Farias

In a previous paper [Phys.Rev.E 83, 051911] we have shown that the results of a quantum-mechanical calculation of electronic energy transfer (EET) over aggregates of coupled monomers can be described also by a model of interacting classical…

量子物理 · 物理学 2012-05-18 A. Eisfeld , J. S. Briggs

In this paper we consider dynamics of a molecular system subjected to external pumping by a light source. Within a completely quantum mechanical treatment, we derive a general formula, which enables to asses effects of different light…

生物物理 · 物理学 2012-01-30 Tomas Mancal , Leonas Valkunas