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Genetic Programming is an evolutionary algorithm that generates computer programs, or mathematical expressions, to solve complex problems. In this Guide, we demonstrate how to use Genetic Programming to develop surrogate models to mitigate…

Molecular communication is a novel approach for data transmission between miniaturized devices, especially in contexts where electrical signals are to be avoided. The communication is based on sending molecules (or other particles) at nano…

新兴技术 · 计算机科学 2023-08-08 Max Bartunik , Jens Kirchner , Oliver Keszocze

Rate-distortion-perception theory generalizes Shannon's rate-distortion theory by introducing a constraint on the perceptual quality of the output. The perception constraint complements the conventional distortion constraint and aims to…

信息论 · 计算机科学 2022-04-14 Jun Chen , Lei Yu , Jia Wang , Wuxian Shi , Yiqun Ge , Wen Tong

We recount recent history behind building compact models of nonlinear, complex processes and identifying their relevant macroscopic patterns or "macrostates". We give a synopsis of computational mechanics, predictive rate-distortion theory,…

统计力学 · 物理学 2014-12-31 James P. Crutchfield , Ryan G. James , Sarah Marzen , Dowman P. Varn

Biological networks have evolved to be highly functional within uncertain environments while remaining extremely adaptable. One of the main contributors to the robustness and evolvability of biological networks is believed to be their…

分子网络 · 定量生物学 2008-02-14 Arend Hintze , Christoph Adami

While there are continuous efforts to introduce new communication systems and standards, it is legitimate to ask the question: how can one send additional bits by minimally changing the systems that are already operating? This is of a…

信息论 · 计算机科学 2012-02-03 Petar Popovski , Zoran Utkovski

Many complex networks depend upon biological entities for their preservation. Such entities, from human cognition to evolution, must first encode and then replicate those networks under marked resource constraints. Networks that survive are…

物理与社会 · 物理学 2021-03-02 Christopher W. Lynn , Danielle S. Bassett

Despite being optimized, the information processing of biological organisms exhibits significant variability in its complexity and capability. One potential source of this diversity is the limitation of resources required for information…

生物物理 · 物理学 2025-10-21 Takehiro Tottori , Tetsuya J. Kobayashi

Biological signaling is imagined as a combination of activation and transport. The former is triggered by local molecular interactions and the latter is the result of molecular diffusion. However, other fundamental physical principles of…

生物物理 · 物理学 2016-12-07 Bernhard Fichtl , Matthias F. Schneider

The living cell expends energetic and material resources to reliably process information from its environment. To do so, it utilises unreliable molecular circuitry that is subject to thermal and other fluctuations. Here, we argue that…

软凝聚态物质 · 物理学 2022-04-12 Kabir Husain , Sriram Ramaswamy , Madan Rao

We propose a physical model to describe the mechanisms of two major scenarios of the genetic code evolution, the codon capture and ambiguous intermediate scenarios, in a consistent manner. We sketch the lowest dimensional version of our…

种群与进化 · 定量生物学 2009-09-30 Tatsuro Yamashita , Osamu Narikiyo

For the study of complex synthetic and biological molecular systems by computer simulations one is still restricted to simple model systems or to by far too small time scales. To overcome this problem multiscale techniques are being…

统计力学 · 物理学 2007-05-23 Matej Praprotnik , Kurt Kremer , Luigi Delle Site

Task-Oriented Source Coding (TOSC) has emerged as a paradigm for efficient visual data communication in machine-centric inference systems, where bitrate, latency, and task performance must be jointly optimized under resource constraints.…

信息论 · 计算机科学 2026-02-16 Andriy Enttsel , Vincent Corlay

Living organisms are the most complex, interesting and significant objects regarding all substructures of the universe. Life science is regarded as a science of the 21st century and one can expect great new discoveries in the near futures.…

其他定量生物学 · 定量生物学 2009-11-23 Branko Dragovich

Metazoans are capable of gathering information from their environments and respond in predictable ways. These computational tasks are achieved by means of more or less complex networks of neurons. Task performance must be reliable over an…

神经元与认知 · 定量生物学 2019-09-26 Aina Ollé-Vila , Luís F. Seoane , Ricard Solé

We consider the problem of communication over a network containing a hidden and malicious adversary that can control a subset of network resources, and aims to disrupt communications. We focus on omniscient node-based adversaries, i.e., the…

信息论 · 计算机科学 2016-05-09 Peida Tian , Sidharth Jaggi , Mayank Bakshi , Oliver Kosut

A novel inter-frame coding approach to the problem of varying channel-state conditions in broadcast wireless communication is developed in this paper; this problem causes the appropriate code-rate to vary across different transmitted frames…

信息论 · 计算机科学 2015-11-11 Hady Zeineddine , Mohammad M. Mansour

Biological organisms are composed of numerous interconnected biochemical processes. Diseases occur when normal functionality of these processes is disrupted. Thus, understanding these biochemical processes and their interrelationships is a…

人工智能 · 计算机科学 2014-03-04 Saadat Anwar

An information-spectrum approach is applied to solve the multiterminal source coding problem for correlated general sources, where sources may be nonstationary and/or nonergodic, and the distortion measure is arbitrary and may be…

信息论 · 计算机科学 2007-07-13 Shengtian Yang , Peiliang Qiu

Networks are widely used to represent interaction pattern among the components in complex systems. Structures of real networks from differ- ent domains may vary quite significantly. Since there is an interplay be- tween network architecture…

定量方法 · 定量生物学 2016-05-10 Krishanu Deyasi , Shashankaditya Upadhyay , Anirban Banerjee