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A rapid, cost-effective and easy method that allows on-site determination of the concentration of live and dead bacterial cells using a fibre-based spectroscopic device (the optrode system) is proposed and demonstrated. Identification of…

定量方法 · 定量生物学 2018-09-12 Fang Ou , Cushla McGoverin , Simon Swift , Frédérique Vanholsbeeck

Filamentous phage, such as fd used in this study, are thread-shaped bacterial viruses. Their outer coat is a tube formed by thousands equal copies of the major coat protein pVIII. We constructed libraries of random peptides fused to all…

We consider the problem of identifying a pattern of faults from a set of noisy linear measurements. Unfortunately, maximum a posteriori probability estimation of the fault pattern is computationally intractable. To solve the fault…

信息论 · 计算机科学 2015-03-13 Danny Bickson , Dror Baron , Alex T. Ihler , Harel Avissar , Danny Dolev

The complex nature of inertial confinement fusion (ICF) experiments results in a very large number of experimental parameters that are only known with limited reliability. These parameters, combined with the myriad physical models that…

等离子体物理 · 物理学 2015-06-15 Jim A Gaffney , Dan Clark , Vijay Sonnad , Stephen B Libby

Compared to the linear MIMO detectors, the Belief Propagation (BP) detector has shown greater capabilities in achieving near optimal performance and better nature to iteratively cooperate with channel decoders. Aiming at real applications,…

信息论 · 计算机科学 2022-06-28 Wenyue Zhou , Yifei Shen , Liping Li , Yongming Huang , Chuan Zhang , Xiaohu You

Femtosecond x-ray nanocrystallography exploiting XFEL radiation is an emerging method for protein structure determination using crystals with sizes ranging from a few tens to a few hundreds nanometers. Crystals are randomly hit by XFEL…

Bacterial heterogeneity is pivotal for adaptation to diverse environments, posing significant challenges in microbial diagnostics and therapeutic interventions. Recent advancements in high-resolution optical microscopy have revolutionized…

Plasma impedance probes (PIPs) are a type of RF probe that primarily measure electron density. This work introduces two advancements: a streamlined analytical model for interpreting PIP-monopole measurements and techniques for achieving…

等离子体物理 · 物理学 2023-07-27 John W. Brooks , Erik M. Tejero , Matthew C. Paliwoda , Michael S. McDonald

Antibiotic resistance is a topical problem for both humans and animals and has been the subject of special monitoring for two decades. Several recent studies, including ours, have shown that this phenomenon is accentuated by the transfer of…

生物大分子 · 定量生物学 2021-08-16 Mbarga Manga Joseph Arsene

Bacteriophages are viruses that target bacteria, playing a crucial role in microbial ecology. Phage proteins are important in understanding phage biology, such as virus infection, replication, and evolution. Although a large number of new…

定量方法 · 定量生物学 2024-08-20 Jiaojiao Guan , Yongxin Ji , Cheng Peng , Wei Zou , Xubo Tang , Jiayu Shang , Yanni Sun

In this paper we propose a new method for multiple change-point detection for piecewise-constant circular signals, a setting that, despite its importance in many scientific domains, remains comparatively under-explored. The proposed method,…

统计方法学 · 统计学 2026-03-12 Sophia Loizidou , Andreas Anastasiou , Christophe Ley

We introduce bidirectional edge diffraction response function (BEDRF), a new approach to model wave diffraction around edges with path tracing. The diffraction part of the wave is expressed as an integration on path space, and the wave-edge…

声音 · 计算机科学 2023-06-06 Chunxiao Cao , Zili An , Zhong Ren , Dinesh Manocha , Kun Zhou

We design statistical hypothesis tests for performing leak detection in water pipeline channels. By applying an appropriate model for signal propagation, we show that the detection problem becomes one of distinguishing signal from noise,…

信号处理 · 电气工程与系统科学 2022-10-25 Liusha Yang , Matthew R. McKay , Xun Wang

Simultaneous identification and metabolic analysis of microbes with single-cell resolution and high throughput is necessary to answer the question of "who eats what, when, and where" in complex microbial communities. Here, we present a…

生物物理 · 物理学 2022-09-13 Yeran Bai , Zhongyue Guo , Fátima C. Pereira , Michael Wagner , Ji-Xin Cheng

Contamination by Radio Frequency Interference (RFI) is a ubiquitous challenge for radio astronomy. In particular, transient RFI is difficult to detect and avoid, especially in large data sets with many time bins. In this work, we present a…

天体物理仪器与方法 · 物理学 2023-10-04 Dominic Anstey , Samuel A. K. Leeney

It is widely known in the machine learning community that class noise can be (and often is) detrimental to inducing a model of the data. Many current approaches use a single, often biased, measurement to determine if an instance is noisy. A…

机器学习 · 统计学 2014-03-11 Michael R. Smith , Tony Martinez

The properties of the fluctuations large enough to induce bifurcations at open chemical systems at steady constraints are studied. The fluctuations that come from the diffusion-induced noise are considered. It is a generic for the surface…

统计力学 · 物理学 2007-05-23 Maria K. Koleva , L. A. Petrov

We present a generic analytical scheme for the quantification of fluctuations due to bifunctionality-induced signal transduction within the members of bacterial two-component system. The proposed model takes into account post-translational…

Identification of particles generated by ion collisions in the NICA collider is one of the basic functions of the Multipurpose Detector (MPD). The main means of identification in MPD are the time-of-flight system (TOF) and the…

Living systems have time-evolving interactions that, until recently, could not be identified accurately from recorded time series in the presence of noise. Stankovski et al. (Phys. Rev. Lett. 109 024101, 2012) introduced a method based on…

数据分析、统计与概率 · 物理学 2013-01-14 Andrea Duggento , Tomislav Stankovski , Peter V. E. McClintock , Aneta Stefanovska