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Ecological systems can be seen as networks of interactions between individual, species, or habitat patches. A key feature of many ecological networks is their organization into modules, which are subsets of elements that are more connected…

High-throughput techniques are leading to an explosive growth in the size of biological databases and creating the opportunity to revolutionize our understanding of life and disease. Interpretation of these data remains, however, a major…

分子网络 · 定量生物学 2009-11-11 Roger Guimera , Luis A. Nunes Amaral

Layered neural networks have greatly improved the performance of various applications including image processing, speech recognition, natural language processing, and bioinformatics. However, it is still difficult to discover or interpret…

机器学习 · 统计学 2017-10-05 Chihiro Watanabe , Kaoru Hiramatsu , Kunio Kashino

It has been hypothesized that some form of "modular" structure in artificial neural networks should be useful for learning, compositionality, and generalization. However, defining and quantifying modularity remains an open problem. We cast…

机器学习 · 计算机科学 2022-06-23 Richard D. Lange , David S. Rolnick , Konrad P. Kording

Complex networks often have a modular structure, where a number of tightly- connected groups of nodes (modules) have relatively few interconnections. Modularity had been shown to have an important effect on the evolution and stability of…

物理与社会 · 物理学 2014-04-21 Saray Shai , Dror Y. Kenett , Yoed N. Kenett , Miriam Faust , Simon Dobson , Shlomo Havlin

Many complex systems in nature and society can be described in terms of networks capturing the intricate web of connections among the units they are made of. A key question is how to interpret the global organization of such networks as the…

物理与社会 · 物理学 2007-05-23 Gergely Palla , Imre Derenyi , Illes Farkas , Tamas Vicsek

Network science is an interdisciplinary endeavor, with methods and applications drawn from across the natural, social, and information sciences. A prominent problem in network science is the algorithmic detection of tightly-connected groups…

数据分析、统计与概率 · 物理学 2010-07-14 Peter J. Mucha , Thomas Richardson , Kevin Macon , Mason A. Porter , Jukka-Pekka Onnela

Much effort has gone into understanding the modular nature of complex networks. Communities, also known as clusters or modules, are typically considered to be densely interconnected groups of nodes that are only sparsely connected to other…

物理与社会 · 物理学 2012-06-26 James P. Bagrow

Community structure is one of the most relevant features encountered in numerous real-world applications of networked systems. Despite the tremendous effort of scientists working on this subject over the past few decades to characterize,…

物理与社会 · 物理学 2019-12-18 Hocine Cherifi , Gergely Palla , Boleslaw K. Szymanski , Xiaoyan Lu

Complex networks play a crucial role in understanding physical, biological, social and technological systems. One of the most relevant features of graphs representing real systems is community structure. In this paper, for a specific…

概率论 · 数学 2024-04-18 Yu Miao , Qing Yin

Complex systems are successfully reduced to interacting elements via the network concept. Transport plays a key role in the survival of networks. For example the specialized signaling cascades of cellular networks filter noise and…

生物物理 · 物理学 2010-10-05 Robin Palotai , Peter Csermely

Monolithic neural networks that make use of a single set of weights to learn useful representations for downstream tasks explicitly dismiss the compositional nature of data generation processes. This characteristic exists in data where…

计算机视觉与模式识别 · 计算机科学 2023-06-05 Hamed Damirchi , Forest Agostinelli , Pooyan Jamshidi

Identifying and understanding modular organizations is centrally important in the study of complex systems. Several approaches to this problem have been advanced, many framed in information-theoretic terms. Our treatment starts from the…

适应与自组织系统 · 物理学 2015-01-19 Artemy Kolchinsky , Luis M. Rocha

Complex systems are characterized by many interacting units that give rise to emergent behavior. A particularly advantageous way to study these systems is through the analysis of the networks that encode the interactions among the system's…

物理与社会 · 物理学 2019-03-21 Alberto Aleta , Yamir Moreno

The modular decomposition is a technique that applies but is not restricted to graphs. The notion of module naturally appears in the proofs of many graph theoretical theorems. Computing the modular decomposition tree is an important…

离散数学 · 计算机科学 2009-12-10 Michel Habib , Christophe Paul

Analytical approaches to model the structure of complex networks can be distinguished into two groups according to whether they consider an intensive (e.g., fixed degree sequence and random otherwise) or an extensive (e.g., adjacency…

物理与社会 · 物理学 2019-02-13 Antoine Allard , Laurent Hébert-Dufresne

Inspired from human cognition, machine learning systems are gradually revealing advantages of sparser and more modular architectures. Recent work demonstrates that not only do some modular architectures generalize well, but they also lead…

机器学习 · 计算机科学 2022-06-07 Sarthak Mittal , Yoshua Bengio , Guillaume Lajoie

Communities are clusters of nodes with a higher than average density of internal connections. Their detection is of great relevance to better understand the structure and hierarchies present in a network. Modularity has become a standard…

物理与社会 · 物理学 2015-03-17 Filippo Radicchi , Andrea Lancichinetti , José J. Ramasco

Training a Neural Network (NN) with lots of parameters or intricate architectures creates undesired phenomena that complicate the optimization process. To address this issue we propose a first modular approach to NN design, wherein the NN…

机器学习 · 计算机科学 2019-02-26 David Castillo-Bolado , Cayetano Guerra-Artal , Mario Hernandez-Tejera

To comprehend the multipartite organization of large-scale biological and social systems, we introduce a new information theoretic approach that reveals community structure in weighted and directed networks. The method decomposes a network…

物理与社会 · 物理学 2008-02-13 M. Rosvall , C. T. Bergstrom