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The structure and stability of strongly charged complex fibers formed by complexation of a single long semi-flexible polyelectrolyte (PE) chain and many oppositely charged spherical macroions are investigated numerically at the ground-state…

软凝聚态物质 · 物理学 2015-03-18 Hoda Boroudjerdi , Ali Naji , Roland R. Netz

We propose a simple discrete stochastic model for calcium dynamics in living cells. Specifically, the calcium concentration distribution is assumed to give rise to a set of probabilities for the opening/closing of channels which release…

patt-sol · 物理学 2009-10-31 Markus Baer , Martin Falcke , Herbert Levine , Lev S. Tsimring

Performing a comprehensive side-channel analysis evaluation of small embedded devices is a process known for its variability and complexity. In real-world experimental setups, the results are largely influenced by a huge amount of…

密码学与安全 · 计算机科学 2020-06-24 Unai Rioja , Servio Paguada , Lejla Batina , Igor Armendariz

Recently, a model of a decentralized control system with local and remote controllers connected over unreliable channels was presented in [1]. The model has a non-classical information structure that is not partially nested. Nonetheless, it…

系统与控制 · 电气工程与系统科学 2019-11-06 Mohammad Afshari , Aditya Mahajan

How condensed-matter simulations depend on the number of molecules being simulated ($N$) is sometimes itself a valuable piece of information. Liquid crystals provide a case in point. Light scattering and $2d$-IR experiments on…

软凝聚态物质 · 物理学 2024-12-20 Eleftherios Mainas , Richard M. Stratt

It has long been accepted that the multiple-ion single-file transport model is appropriate for many kinds of ion channels. However, most of the purely theoretical works in this field did not capture all of the important features of the…

生物物理 · 物理学 2013-09-02 Kuo Kan Liang

Evolution produces complex and structured networks of interacting components in chemical, biological, and social systems. We describe a simple mathematical model for the evolution of an idealized chemical system to study how a network of…

适应与自组织系统 · 物理学 2014-03-05 Sanjay Jain , Sandeep Krishna

Chemical vapor deposition synthesis of single-walled carbon nanotubes experiments, using Fe catalyst, and alternating methane and carbon monoxide as carbon feedstocks, lead to the reversible formation of junctions between tubes of different…

Soft matters whose constituents are deformable are ubiquitous in nature especially in biological systems-including cells and their organelles-as well as in foams and emulsions. The capacity for deformation in these soft materials gives rise…

软凝聚态物质 · 物理学 2026-03-05 Padmanabha Bose , Smarajit Karmakar

We study ion pair dissociation in water at ambient conditions using a combination of classical and ab initio approaches. The goal of this study is to disentangle the sources of discrepancy observed in computed potentials of mean force. In…

化学物理 · 物理学 2021-06-02 Alec Wills , Marivi Fernández-Serra

We consider the effect of mobile ions on the applied potential needed to reorient a lamellar system of two different materials placed between two planar electrodes. The reorientation occurs from a configuration parallel to the electrodes…

软凝聚态物质 · 物理学 2012-07-19 Gregory Garbès Putzel , David Andelman , Yoav Tsori , Michael Schick

The question how complex systems become more organized and efficient with time is open. Examples are, the formation of elementary particles from pure energy, the formation of atoms from particles, the formation of stars and galaxies, the…

物理与社会 · 物理学 2017-01-17 Georgi Georgiev , Atanu Chatterjee , Germano Iannacchione

The amorphous structure of nanoporous carbon electrodes in supercapacitors complicates the establishment of clear links between electrode geometry and capacitance. In this work, we examine how specific structural features govern charge…

化学物理 · 物理学 2026-01-06 Koushik Sarkar , Muhammad Anisuzzaman Talukder

Efficient and safe energy storage technologies are essential for realizing a sustainable and electrified society. Among the key challenges, the design of superionic conductors for all-solid-state batteries often faces a fundamental…

材料科学 · 物理学 2025-11-06 Rikuya Ishikawa , Kyohei Takae , Rei Kurita

We present some computer simulations run on a stochastic CA (cellular automaton). The CA simulates a gas of particles which are in a channel, the interval $[1,L]$ in $\mathbb Z$, but also in "reservoirs" $\mathcal R_1$ and $\mathcal R_2$.…

统计力学 · 物理学 2017-04-26 Matteo Colangeli , Anna De Masi , Errico Presutti

This study investigates the probability of threading in star catenanes under good solvent conditions using molecular dynamics simulations, emphasizing the influence of ring rigidity. Threading in these systems arises from the interplay…

计算物理 · 物理学 2024-12-12 Zahra Ahmadian Dehaghani

How patterns and structures undergo symmetry breaking and self-organize within biological systems from initially homogeneous states is a key issue for biological development. The activator-inhibitor (AI) mechanism, derived from…

生物物理 · 物理学 2022-11-01 Xiaoliang Wang , Andrew Harrison

In this paper we introduce some simple models, based on rolling dice, to explore mechanisms proposed to explain planetary habitability. The idea is to study these selection mechanisms in an analytically tractable setting, isolating their…

种群与进化 · 定量生物学 2024-07-30 Rudy Arthur , Arwen Nicholson

Motivated by recent experimental work, we define and study a deterministic model of the complex miRNA-based regulatory circuit that putatively controls the early stage of myogenesis in human. We aim in particular at a quantitative…

分子网络 · 定量生物学 2019-06-25 Jonathan Fiorentino , Andrea De Martino

The behaviour of a system of ion channels formed across the cell membrane is presented. The infinite number of channels with an infinite coupling is introduced first as a reference point for the detailed derivation of the…

生物物理 · 物理学 2007-05-23 Adam Rycerz