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The cortical array is a structure consisting of highly aligned microtubules which plays a crucial role in the characteristic uniaxial expansion of all growing plant cells. Recent experiments have shown polymerization-driven collisions…

亚细胞过程 · 定量生物学 2010-02-07 Simon H. Tindemans , Rhoda J. Hawkins , Bela M. Mulder

The dynamic behavior of microtubules in solution can be strongly modified by interactions with walls or other structures. We examine here a microtubule growth model where the increase in size of the plus-end is perturbed by collisions with…

软凝聚态物质 · 物理学 2010-09-29 Vladimir A. Baulin , Carlos M. Marques , Fabrice Thalmann

We present a systematic study of the influence of cell geometry on the orientational distribution of microtubules (MTs) nucleated from a single microtubule organizing center (MTOC). For simplicity we consider an elliptical cell geometry, a…

生物大分子 · 定量生物学 2022-11-30 Panayiotis Foteinopoulos , Bela M. Mulder

In growing plant cells, parallel ordering of microtubules (MTs) along the inner surface of the cell membrane influences the direction of cell expansion and thereby plant morphology. For correct expansion of organs that primarily grow by…

生物物理 · 物理学 2019-09-05 Sven Bachmann , Richard Froese , Eric N Cytrynbaum

Microtubules self-organize to form part of the cellular cytoskeleton. They give cells their shape and play a crucial role in cell division and intracellular transport. Strikingly, microtubules driven by motor proteins reorganize into stable…

适应与自组织系统 · 物理学 2024-05-16 Nikita Frolov , Bram Bijnens , Daniel Ruiz-Reynés , Lendert Gelens

We propose a two-dimensional model for the organization of stabilized microtubules driven by molecular motors in an unconfined geometry. In this model two kinds of dynamics are competing. The first one is purely diffusive, with an…

统计力学 · 物理学 2019-08-17 B. Bassetti , M. Cosentino Lagomarsino , P. Jona

Growth and shape formation in crowded multicellular assemblies arise from the interplay of chemical gradients, single-cell expansion and mechanical interactions, making it essential to understand how these processes jointly shape collective…

软凝聚态物质 · 物理学 2025-12-02 Ilias-Marios Sarris , Ramin Golestianian , Philip Bittihn

The microtubule cytoskeleton is comprised of dynamic, polarized filaments that facilitate transport within the cell. Polarized microtubule arrays are key to facilitating cargo transport in long cells such as neurons. Microtubules also…

We study the dynamics and phase behaviour of a dry suspension of microtubules and molecular motors. We obtain a set of continuum equations by rigorously coarse graining a microscopic model where motor-induced interactions lead to parallel…

软凝聚态物质 · 物理学 2018-06-27 Ivan Maryshev , Andrew B. Goryachev , Davide Marenduzzo , Alexander Morozov

In densely-packed two-dimensional systems of growing cells, such as rod-shaped bacteria, a number of experimental and numerical studies report distinct patterns of nematic orientational order in the presence of confinement. So far, these…

软凝聚态物质 · 物理学 2025-06-13 Lukas Hupe , Jonas Isensee , Ramin Golestanian , Philip Bittihn

Directional growth caused by gravitropism and corresponding bending of plant cells has been explored since 19th century, however, many aspects of mechanisms underlying the perception of gravity at the molecular level are still not well…

生物物理 · 物理学 2015-12-01 Alexander Muratov , Vladimir A. Baulin

It is known that the orientation of cellulose microfibrils within plant cell walls has an important impact on the morphogenesis of plant cells and tissues. Viewing the shape of a plant cell as a square prism or cylinder with the axis…

细胞行为 · 定量生物学 2015-09-17 Mariya Ptashnyk , Brian Seguin

The microtubule cytoskeleton is responsible for sustained, long-range intracellular transport of mRNAs, proteins, and organelles in neurons. Neuronal microtubules must be stable enough to ensure reliable transport, but they also undergo…

动力系统 · 数学 2024-03-05 Anna C Nelson , Melissa M Rolls , Maria-Veronica Ciocanel , Scott A McKinley

We derive a model describing spatio-temporal organization of an array of microtubules interacting via molecular motors. Starting from a stochastic model of inelastic polar rods with a generic anisotropic interaction kernel we obtain a set…

软凝聚态物质 · 物理学 2007-05-23 Igor S. Aronson , Lev S. Tsimring

Many cells contain non-centrosomal arrays of microtubules (MT), but the assembly, organisation and function of these arrays are poorly understood. We present the first theoretical model for the non-centrosomal MT cytoskeleton in…

亚细胞过程 · 定量生物学 2015-09-29 Philipp Khuc Trong , Hélène Doerflinger , Jörn Dunkel , Daniel St. Johnston , Raymond E. Goldstein

Microtubule dynamics is largely influenced by nucleotide hydrolysis and the resultant tubulin configuration changes. The GTP cap model has been proposed to interpret the stabilizing mechanism of microtubule growth from the view of…

生物物理 · 物理学 2015-05-30 Xiang-Ying Ji , Xi-Qiao Feng

Neuronal growth cones are the most sensitive amongst eukaryotic cells in responding to directional chemical cues. Although a dynamic microtubule cytoskeleton has been shown to be essential for growth cone turning, the precise nature of…

亚细胞过程 · 定量生物学 2019-05-16 Saurabh Mahajan , Chaitanya A. Athale

During colony growth, complex interactions regulate the bacterial orientation, leading to the formation of large-scale ordered structures, including topological defects and microdomains. These structures may benefit bacterial strains,…

生物物理 · 物理学 2024-04-10 Mustafa Başaran , Y. Ilker Yaman , Tevfik Can Yuce , Roman Vetter , Askin Kocabas

We derive a model describing spatio-temporal organization of an array of microtubules interacting via molecular motors. Starting from a stochastic model of inelastic polar rods with a generic anisotropic interaction kernel we obtain a set…

软凝聚态物质 · 物理学 2007-05-23 Igor S. Aranson , Lev S. Tsimring

Cells are strongly out-of-equilibrium systems driven by continuous energy supply. They carry out many vital functions requiring active transport of various ingredients and organelles, some being small, others being large. The cytoskeleton,…

生物物理 · 物理学 2017-09-20 Cecile Appert-Rolland , Maximilian Ebbinghaus , Ludger Santen
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