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We propose a network characterization of combinatorial fitness landscapes by adapting the notion of inherent networks proposed for energy surfaces. We use the well-known family of NK landscapes as an example. In our case the inherent…

统计力学 · 物理学 2012-07-20 Marco Tomassini , Sébastien Verel , Gabriela Ochoa

We propose a network characterization of combinatorial fitness landscapes by adapting the notion of inherent networks proposed for energy surfaces (Doye, 2002). We use the well-known family of $NK$ landscapes as an example. In our case the…

神经与进化计算 · 计算机科学 2008-10-21 Gabriela Ochoa , Marco Tomassini , Sébastien Verel , Christian Darabos

In previous work we have introduced a network-based model that abstracts many details of the underlying landscape and compresses the landscape information into a weighted, oriented graph which we call the local optima network. The vertices…

人工智能 · 计算机科学 2011-07-22 Sébastien Verel , Gabriela Ochoa , Marco Tomassini

This chapter overviews a recently introduced network-based model of combinatorial landscapes: Local Optima Networks (LON). The model compresses the information given by the whole search space into a smaller mathematical object that is a…

神经与进化计算 · 计算机科学 2014-02-13 Gabriela Ochoa , Sébastien Verel , Fabio Daolio , Marco Tomassini

Simulated landscapes have been used for decades to evaluate search strategies whose goal is to find the landscape location with maximum fitness. Applications include modeling the capacity of enzymes to catalyze reactions and the clinical…

神经与进化计算 · 计算机科学 2013-02-15 Jeffrey S. Buzas , Jeffrey Dinitz

Local Optima Networks (LONs) have been recently proposed as an alternative model of combinatorial fitness landscapes. The model compresses the information given by the whole search space into a smaller mathematical object that is the graph…

人工智能 · 计算机科学 2012-10-16 Fabio Daolio , Sébastien Verel , Gabriela Ochoa , Marco Tomassini

This paper extends a recently proposed model for combinatorial landscapes: Local Optima Networks (LON), to incorporate a first-improvement (greedy-ascent) hill-climbing algorithm, instead of a best-improvement (steepest-ascent) one, for the…

神经与进化计算 · 计算机科学 2012-07-19 Gabriela Ochoa , Sébastien Verel , Marco Tomassini

By dividing potential energy landscapes into basins of attractions surrounding minima and linking those basins that are connected by transition state valleys, a network description of energy landscapes naturally arises. These networks are…

统计力学 · 物理学 2007-05-23 Jonathan P. K. Doye , Claire P. Massen

Quantification of the stationary points and the associated basins of attraction of neural network loss surfaces is an important step towards a better understanding of neural network loss surfaces at large. This work proposes a novel method…

机器学习 · 计算机科学 2019-01-10 Anna Sergeevna Bosman , Andries Engelbrecht , Mardé Helbig

One of the most common problem-solving heuristics is by analogy. For a given problem, a solver can be viewed as a strategic walk on its fitness landscape. Thus if a solver works for one problem instance, we expect it will also be effective…

机器学习 · 计算机科学 2023-12-06 Mingyu Huang , Ke Li

Fitness landscapes are genotype to fitness mappings commonly used in evolutionary biology and computer science which are closely related to spin glass models. In this paper, we study the NK model for fitness landscapes where the interaction…

种群与进化 · 定量生物学 2015-06-12 Stefan Nowak , Joachim Krug

Modern neural networks exhibit a striking property: basins of attraction in the loss landscape are often connected by low-loss paths, yet optimization dynamics generally remain confined to a single convex basin and rarely explore…

机器学习 · 计算机科学 2026-03-13 Luca Di Carlo , Chase Goddard , David J. Schwab

In this paper we present a combinatorial optimisation view on the routing problem for connectionless packet networks by using the metaphor of a landscape. We examine the main properties of the routing landscapes as we define them and how…

网络与互联网体系结构 · 计算机科学 2007-05-23 T. Michalareas , L. Sacks

This research addresses the challenge of characterizing the complexity and unpredictability of basins within various dynamical systems. The main focus is on demonstrating the efficiency of convolutional neural networks (CNNs) in this field.…

机器学习 · 计算机科学 2024-06-18 David Valle , Alexandre Wagemakers , Miguel A. F. Sanjuán

Evolutionary adaptation is the process that increases the fit of a population to the fitness landscape it inhabits. As a consequence, evolutionary dynamics is shaped, constrained, and channeled, by that fitness landscape. Much work has been…

种群与进化 · 定量生物学 2010-12-17 Bjørn Østman , Arend Hintze , Christoph Adami

A fitness landscape is a genetic space -- with two genotypes adjacent if they differ in a single locus -- and a fitness function. Evolutionary dynamics produce a flow on this landscape from lower fitness to higher; reaching equilibrium only…

种群与进化 · 定量生物学 2013-08-26 Artem Kaznatcheev

These notes introduce probabilistic landscape models defined on high-dimensional discrete sequence spaces. The models are motivated primarily by fitness landscapes in evolutionary biology, but links to statistical physics and computer…

种群与进化 · 定量生物学 2025-12-24 Sakshi Pahujani , Joachim Krug

In this article we investigate the topological changes undergone by trajectory networks as a consequence of progressive geographical infiltration. Trajectory networks, a type of knitted network, are obtained by establishing paths between…

离散数学 · 计算机科学 2008-04-21 Luciano da Fontoura Costa

We explore a novel method to generate and characterize complex networks by means of their embedding on hyperbolic surfaces. Evolution through local elementary moves allows the exploration of the ensemble of networks which share common…

统计力学 · 物理学 2007-09-19 T. Aste , T. Di Matteo , S. T. Hyde

The local optima network model has proved useful in the past in connection with combinatorial optimization problems. Here we examine its extension to the real continuous function domain. Through a sampling process, the model builds a…

统计力学 · 物理学 2022-12-21 Marco Tomassini
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