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Mutations in a microbial population can increase the frequency of a genotype not only by increasing its exponential growth rate, but also by decreasing its lag time or adjusting the yield (resource efficiency). The contribution of multiple…

种群与进化 · 定量生物学 2018-02-15 Michael Manhart , Bharat V. Adkar , Eugene I. Shakhnovich

In a complex system, the individual components are neither so tightly coupled or correlated that they can all be treated as a single unit, nor so uncorrelated that they can be approximated as independent entities. Instead, patterns of…

种群与进化 · 定量生物学 2015-09-15 Blake C. Stacey

The evolutionary balance between innate and learned behaviors is highly intricate, and different organisms have found different solutions to this problem. We hypothesize that the emergence and exact form of learning behaviors is naturally…

神经元与认知 · 定量生物学 2023-03-14 Emmanouil Giannakakis , Sina Khajehabdollahi , Anna Levina

Competition between random genetic drift and natural selection plays a central role in evolution: Whereas non-beneficial mutations often prevail in small populations by chance, mutations that sweep through large populations typically confer…

种群与进化 · 定量生物学 2009-11-13 Oskar Hallatschek , Pascal Hersen , Sharad Ramanathan , David R. Nelson

Population expansions trigger many biomedical and ecological transitions, from tumor growth to invasions of non-native species. Although population spreading often selects for more invasive phenotypes, we show that this outcome is far from…

种群与进化 · 定量生物学 2015-12-14 Kirill S. Korolev

We consider the effect of network structure on the evolution of a population. Models of this kind typically consider a population of fixed size and distribution. Here we consider eco-evolutionary dynamics where population size and…

种群与进化 · 定量生物学 2023-04-05 Karan Pattni , Wajid Ali , Mark Broom , Kieran J Sharkey

Modification of the particles in the course of the source evolution is considered. Influence of this effect on multiplicities and correlations of the particles is displayed, including an enhancement of the production rates and identical…

高能物理 - 唯象学 · 物理学 2009-10-31 I. V. Andreev

Frequency-dependent selection reflects the interaction between different species as they battle for limited resources in their environment. In a stochastic evolutionary game the species relative fitnesses guides the evolutionary dynamics…

概率论 · 数学 2020-12-29 Lea Popovic , Liam Peuckert

Species interactions (ranging from direct predator prey relationships to indirect effects mediated by the environment) are central to ecosystem balance and biodiversity. While empirical methods for measuring these interactions exist, their…

种群与进化 · 定量生物学 2025-08-27 Javier Aguilar , Samir Suweis , Amos Maritan , Sandro Azaele

The characterization of plasticity, robustness, and evolvability, an important issue in biology, is studied in terms of phenotypic fluctuations. By numerically evolving gene regulatory networks, the proportionality between the phenotypic…

种群与进化 · 定量生物学 2015-06-15 Kunihiko Kaneko

Structure, composition and stability of ecological populations are shaped by the inter- and intra-species interactions within these communities. It remains to be fully understood how the interplay of these interactions with other factors,…

种群与进化 · 定量生物学 2023-01-16 Nava Leibovich , Jeremy Rothschild , Sidhartha Goyal , Anton Zilman

A simulation model of a population having internal (genetic) structure is presented. The population is subject to selection pressure coming from the environment which is the same in the whole system but changes in time. Reproduction has a…

适应与自组织系统 · 物理学 2012-08-31 Andrzej Pekalski , Marcel Ausloos

In this paper we study the long term dynamics of two prey species and one predator species. In the deterministic setting, if we assume the interactions are of Lotka-Volterra type (competition or predation), the long term behavior of this…

概率论 · 数学 2021-11-29 Alexandru Hening , Dang Nguyen , Nhu Nguyen , Harrison Watts

An extension of the Truscott-Brindley model (Bull. Math. Biol. {\bf 56}, 981 (1994)) is derived to account for the effect of demographic fluctuations. In the presence of seasonal forcing, and sufficiently shallow water conditions, the…

种群与进化 · 定量生物学 2015-06-05 Piero Olla

We propose a general model to study the interplay between spatial dispersal and environment spatiotemporal fluctuations in metapopulation dynamics. An ecological landscape of favorable patches is generated like a L\'{e}vy dust, which allows…

种群与进化 · 定量生物学 2015-08-20 E. H. Colombo , C. Anteneodo

Natural selection imply that any organisms including human being will evolve to improve its fitness advantage and the selected genotype or phenotype in equilibrium state will not vary over the time. However, evolutionary process of…

种群与进化 · 定量生物学 2024-01-30 Jia-Xu Han , Rui-Wu Wang

We show how highly-diverse ecological communities may display persistent abundance fluctuations, when interacting through resource competition and subjected to migration from a species pool. This turns out to be closely related to the ratio…

统计力学 · 物理学 2020-02-12 Itay Dalmedigos , Guy Bunin

It is likely that the strength of selection acting upon a mutation varies through time due to changes in the environment. However, most population genetic theory assumes that the strength of selection remains constant. Here we investigate…

种群与进化 · 定量生物学 2014-03-05 Toni I. Gossmann , David Waxman , Adam Eyre-Walker

Competition between species and genotypes is a dominant factor in a variety of ecological and evolutionary processes. Biological dynamics are typically highly stochastic, and therefore, analyzing a competitive system requires accounting for…

种群与进化 · 定量生物学 2025-01-09 Ori Turkia , Nadav M. Shnerb

In this paper we consider a microscopic model of a simple ecosystem. The basic ingredients of this model are individuals, and both the phenotypic and genotypic levels are taken in account. The model is based on a long range cellular…

统计力学 · 物理学 2007-05-23 Franco Bagnoli , Michele Bezzi