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The sedimentation process in a suspension of bacteria is the result of the competition between gravity and the intrinsic motion of the microorganisms. We perform simulations of run-and-tumble "squirmers" that move in a fluid medium,…

软凝聚态物质 · 物理学 2021-11-11 Andrea Scagliarini , Ignacio Pagonabarraga

We investigate sedimentation of model hard sphere-like colloidal dispersions confined in horizontal capillaries using laser scanning confocal microscopy, dynamical density functional theory, and Brownian dynamics computer simulations. For…

软凝聚态物质 · 物理学 2009-11-13 C. Patrick Royall , Joachim Dzubiella , Matthias Schmidt , Alfons van Blaaderen

We simulate the mesoscopic dynamics of droplets formed by phase separated fluids at nanometer scales where thermal fluctuations are significant. Both spherical droplets fully immersed in a second fluid and sessile droplets which are also in…

流体动力学 · 物理学 2024-11-18 John B. Bell , Andrew Nonaka , Alejandro L. Garcia

Continuing on our previous work [ArXiv:1212.2644], we develop semi-implicit numerical methods for solving low Mach number fluctuating hydrodynamic equations appropriate for modeling diffusive mixing in isothermal mixtures of fluids with…

数值分析 · 数学 2016-01-20 A. J. Nonaka , Y. Sun , J. B. Bell , A. Donev

We study crystal nucleation under the influence of sedimentation in a model of colloidal hard spheres via Brownian Dynamics simulations. We introduce two external fields acting on the colloidal fluid: a uniform gravitational field (body…

软凝聚态物质 · 物理学 2013-07-03 John Russo , Anthony C. Maggs , Daniel Bonn , Hajime Tanaka

We construct the hydrodynamic theory of coherent collective motion ("flocking") at a solid-liquid interface. The polar order parameter and concentration of a collection of "active" (self-propelled) particles at a planar interface between a…

软凝聚态物质 · 物理学 2022-01-05 Niladri Sarkar , Abhik Basu , John Toner

Static and dynamical structure factors for shear and longitudinal modes of the velocity and density fields are computed for a granular system fluidized by a stochastic bath with friction. Analytical expressions are obtained through…

统计力学 · 物理学 2015-05-28 Giacomo Gradenigo , Alessandro Sarracino , Dario Villamaina , Andrea Puglisi

We study diffusion of colloids on a fluid-fluid interface using particle simulations and fluctuating hydrodynamics. Diffusion on a two-dimensional interface with three-dimensional hydrodynamics is known to be anomalous, with the collective…

统计力学 · 物理学 2018-08-01 R. P. Peláez , F. Balboa Usabiaga , S. Panzuela , Q. Xiao , R. Delgado-Buscalioni , A. Donev

A meshfree Lagrangian method for the fluctuating hydrodynamic equations (FHEs) with fluid-structure interactions is presented. Brownian motion of the particle is investigated by direct numerical simulation of the fluctuating hydrodynamic…

动力系统 · 数学 2015-12-15 Anamika Pandey , Steffen Hardt , Axel Klar , Sudarshan Tiwari

We present a mesoscopic hydrodynamic description of the dynamics of colloidal suspensions. We consider the system as a gas of Brownian particles suspended in a Newtonian heat bath subjected to stationary non-equilibrium conditions imposed…

统计力学 · 物理学 2009-11-11 S. I. Hernandez , I. Santamaria-Holek , Carlos I. Mendoza , L. F. del Castillo

Fluctuating hydrodynamics has been successfully combined with several computational methods to rapidly compute the correlated random velocities of Brownian particles. In the overdamped limit where both particle and fluid inertia are…

计算物理 · 物理学 2016-01-20 Blaise Delmotte , Eric E Keaveny

Particle-particle interactions in sedimenting systems have been investigated in the present study considering the many-body hydrodynamic and electrodynamic interactions. These interactions primarily occur in two modes: near-field and…

流体动力学 · 物理学 2016-05-04 Sagardip Majumder , Jayabrata Dhar , Suman Chakraborty

Dynamic particle-scale numerical simulations are used to show that the shear thickening observed in dense colloidal, or Brownian, suspensions is of a similar nature to that observed in non-colloidal suspensions, i.e., a stress-induced…

软凝聚态物质 · 物理学 2015-12-04 Romain Mari , Ryohei Seto , Jeffrey F. Morris , Morton M. Denn

We analyze the dynamics of a passive colloidal probe immersed in an active bath using an optical trap to study three physical processes: (1) the non-equilibrium fluctuations transferred to the probe by the active bath, (2) the friction…

软凝聚态物质 · 物理学 2022-06-22 Hunter Seyforth , Mauricio Gomez , W. Benjamin Rogers , Jennifer L. Ross , Wylie W. Ahmed

In this work, we investigate the dynamics of the number density fluctuations of a dilute suspension of active particles in a linear viscoelastic fluid. We propose a model for the frequency-dependent diffusion coefficient of the active…

软凝聚态物质 · 物理学 2022-11-08 Juan Ruben Gomez-Solano , Rosalio F. Rodriguez , Elizabeth Salinas-Rodriguez

We use molecular dynamics simulations of the SPC-E model of liquid water to derive probability distributions for water density fluctuations in probe volumes of different shapes and sizes, both in the bulk as well as near hydrophobic and…

统计力学 · 物理学 2014-08-05 Amish J. Patel , David Chandler

We present a numerical method that consistently implements thermal fluctuations and hydrodynamic interactions to the motion of Brownian particles dispersed in incompressible host fluids. In this method, the thermal fluctuations are…

软凝聚态物质 · 物理学 2009-11-13 T. Iwashita , Y. Nakayama , R. Yamamoto

Wavelet Monte Carlo dynamics simulations are used to study the dynamics of passive particles in the presence of microswimmers, taking account of the often-omitted thermal motion alongside the hydrodynamic flows generated by the swimmers.…

软凝聚态物质 · 物理学 2021-07-23 Oliver T. Dyer , Robin C. Ball

We derive hydrodynamics of a prototypical one dimensional model, having variable-range hopping, which mimics passive diffusion and ballistic motion of active, or self-propelled, particles. The model has two main ingredients - the hardcore…

统计力学 · 物理学 2020-05-27 Tanmoy Chakraborty , Subhadip Chakraborti , Arghya Das , Punyabrata Pradhan

A new and very general technique for simulating solid-fluid suspensions is described; its most important feature is that the computational cost scales linearly with the number of particles. The method combines Newtonian dynamics of the…

comp-gas · 物理学 2009-10-22 Anthony J. C. Ladd