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We introduce an unsupervised graph embedding that trades off local node similarity and connectivity, and global structure. The embedding is based on a generalized graph Laplacian, whose eigenvectors compactly capture both network structure…

机器学习 · 计算机科学 2020-10-01 Shay Deutsch , Stefano Soatto

Persistent homology is constrained to purely topological persistence while multiscale graphs account only for geometric information. This work introduces persistent spectral theory to create a unified low-dimensional multiscale paradigm for…

组合数学 · 数学 2019-12-13 Rui Wang , Duc Duy Nguyen , Guo-Wei Wei

Spectral approaches of network analysis heavily rely upon the eigendecomposition of the graph Laplacian. For instance, in graph signal processing, the Laplacian eigendecomposition is used to define the graph Fourier transform and then…

机器学习 · 计算机科学 2017-08-21 Dimitri Van De Ville , Robin Demesmaeker , Maria Giulia Preti

We give a construction of a family of (weighted) graphs that are pairwise cospectral with respect to the normalized Laplacian matrix, or equivalently probability transition matrix. This construction can be used to form pairs of cospectral…

组合数学 · 数学 2015-07-08 Steve Butler , Kristin Heysse

Graphs are used in many disciplines to model the relationships that exist between objects in a complex discrete system. Researchers may wish to compare a network of interest to a "typical" graph from a family (or ensemble) of graphs which…

组合数学 · 数学 2025-08-08 Catherine Greenhill

This paper investigates spectral properties of the deformed Laplacian matrix, which merges the Laplacian and signless Laplacian matrices of a graph through a one-parameter family of matrices. We present general results on the eigenvalues of…

组合数学 · 数学 2025-12-04 Roberto C. Díaz , Elismar R. Oliveira , Vilmar Trevisan

We introduce a quantitative measure of network bipartivity as a proportion of even to total number of closed walks in the network. Spectral graph theory is used to quantify how close to bipartite a network is and the extent to which…

统计力学 · 物理学 2009-11-11 Ernesto Estrada , Juan A. Rodriguez-Velazquez

Determining the effect of structural perturbations on the eigenvalue spectra of networks is an important problem because the spectra characterize not only their topological structures, but also their dynamical behavior, such as…

无序系统与神经网络 · 物理学 2010-05-04 Attilio Milanese , Jie Sun , Takashi Nishikawa

Biomolecular networks have already found great utility in characterizing complex biological systems arising from pair-wise interactions amongst biomolecules. Here, we review how graph theoretical approaches can be applied not only for a…

分子网络 · 定量生物学 2018-12-03 Heeralal Janwa , Steven E. Massey , Julian Velev , Bud Mishra

The study of complex systems benefits from graph models and their analysis. In particular, the eigendecomposition of the graph Laplacian lets emerge properties of global organization from local interactions; e.g., the Fiedler vector has the…

机器学习 · 计算机科学 2017-06-28 Dimitri Van De Ville , Robin Demesmaeker , Maria Giulia Preti

Biomedical networks (or graphs) are universal descriptors for systems of interacting elements, from molecular interactions and disease co-morbidity to healthcare systems and scientific knowledge. Advances in artificial intelligence,…

机器学习 · 计算机科学 2025-02-07 Michelle M. Li , Kexin Huang , Marinka Zitnik

In graph signal processing, the graph adjacency matrix or the graph Laplacian commonly define the shift operator. The spectral decomposition of the shift operator plays an important role in that the eigenvalues represent frequencies and the…

数值分析 · 计算机科学 2016-11-09 Stephen Kruzick , Jose M. F. Moura

Ecological networks originating as a result of three different ecological processes are examined and cross-compared to assess if the underlying ecological processes in these systems produce considerable difference in the structure of the…

种群与进化 · 定量生物学 2018-11-07 Shashankaditya Upadhyay , Sudeepto Bhattacharya

Using methods from algebraic graph theory and convex optimization, we study the relationship between local structural features of a network and spectral properties of its Laplacian matrix. In particular, we derive expressions for the…

最优化与控制 · 数学 2016-11-17 Victor M. Preciado , Ali Jadbabaie , George C. Verghese

The need to build a link between the structure of a complex network and the dynamical properties of the corresponding complex system (comprised of multiple low dimensional systems) has recently become apparent. Several attempts to tackle…

混沌动力学 · 物理学 2012-06-18 Michael Small , Kevin Judd , Thomas Stemler

The spectrum of the normalized Laplacian matrix cannot determine the number of edges in a graph, however finding constructions of cospectral graphs with differing number of edges has been elusive. In this paper we use basic properties of…

组合数学 · 数学 2014-10-27 Steve Butler

The rich spectral information of the graph Laplacian has been instrumental in graph theory, machine learning, and graph signal processing for applications such as graph classification, clustering, or eigenmode analysis. Recently, the Hodge…

代数拓扑 · 数学 2024-03-27 Vincent P. Grande , Michael T. Schaub

The hierarchical product of two graphs represents a natural way to build a larger graph out of two smaller graphs with less regular and therefore more heterogeneous structure than the Cartesian product. Here we study the eigenvalue spectrum…

适应与自组织系统 · 物理学 2016-11-28 Per Sebastian Skardal , Kirsti Wash

We define the harmonic evolution of states of a graph by iterative application of the harmonic operator (Laplacian over $Z_2$). This provides graphs with a new geometric context and leads to a new tool to analyze them. The digraphs of…

组合数学 · 数学 2012-01-09 Jerzy Kocik

Discrete amorphous materials are best described in terms of arbitrary networks which can be embedded in three dimensional space. Investigating the thermodynamic equilibrium as well as non-equilibrium behavior of such materials around second…

统计力学 · 物理学 2013-12-10 Eser Aygun , Ayse Erzan