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In performing a Bayesian analysis, two difficult problems often emerge. First, in estimating the parameters of some model for the data, the resulting posterior distribution may be multi-modal or exhibit pronounced (curving) degeneracies.…

天体物理仪器与方法 · 物理学 2013-12-20 F. Feroz , J. Skilling

Bayesian model selection provides the cosmologist with an exacting tool to distinguish between competing models based purely on the data, via the Bayesian evidence. Previous methods to calculate this quantity either lacked general…

天体物理学 · 物理学 2008-11-26 J. R. Shaw , M. Bridges , M. P. Hobson

We present further development and the first public release of our multimodal nested sampling algorithm, called MultiNest. This Bayesian inference tool calculates the evidence, with an associated error estimate, and produces posterior…

天体物理学 · 物理学 2011-09-28 F. Feroz , M. P. Hobson , M. Bridges

Bayesian inference involves two main computational challenges. First, in estimating the parameters of some model for the data, the posterior distribution may well be highly multi-modal: a regime in which the convergence to stationarity of…

天体物理仪器与方法 · 物理学 2019-12-10 F. Feroz , M. P. Hobson , E. Cameron , A. N. Pettitt

We present a comprehensive comparison of different Markov Chain Monte Carlo (MCMC) sampling methods, evaluating their performance on both standard test problems and cosmological parameter estimation. Our analysis includes traditional…

宇宙学与河外天体物理 · 物理学 2025-02-28 Denitsa Staicova

Many inference problems involve inferring the number $N$ of components in some region, along with their properties $\{\mathbf{x}_i\}_{i=1}^N$, from a dataset $\mathcal{D}$. A common statistical example is finite mixture modelling. In the…

统计计算 · 统计学 2015-01-15 Brendon J. Brewer

Bayesian inference with nested sampling requires a likelihood-restricted prior sampling method, which draws samples from the prior distribution that exceed a likelihood threshold. For high-dimensional problems, Markov Chain Monte Carlo…

统计计算 · 统计学 2023-02-13 Johannes Buchner

We present dynesty, a public, open-source, Python package to estimate Bayesian posteriors and evidences (marginal likelihoods) using Dynamic Nested Sampling. By adaptively allocating samples based on posterior structure, Dynamic Nested…

天体物理仪器与方法 · 物理学 2020-02-12 Joshua S Speagle

Bayesian model selection provides a powerful framework for objectively comparing models directly from observed data, without reference to ground truth data. However, Bayesian model selection requires the computation of the marginal…

统计方法学 · 统计学 2024-01-17 Xiaohao Cai , Jason D. McEwen , Marcelo Pereyra

One of the well-known challenges in optimal experimental design is how to efficiently estimate the nested integrations of the expected information gain. The Gaussian approximation and associated importance sampling have been shown to be…

统计计算 · 统计学 2021-08-17 Quan Long

Nested sampling is a promising tool for Bayesian statistical analysis because it simultaneously performs parameter estimation and facilitates model comparison. MultiNest is one of the most popular nested sampling implementations, and has…

天体物理仪器与方法 · 物理学 2024-09-24 Alexander J. Dittmann

Nested sampling has emerged as a valuable tool for Bayesian analysis, in particular for determining the Bayesian evidence. The method is based on a specific type of random sampling of the likelihood function and prior volume of the…

天体物理仪器与方法 · 物理学 2015-05-27 Charles R. Keeton

When working with multimodal Bayesian posterior distributions, Markov chain Monte Carlo (MCMC) algorithms have difficulty moving between modes, and default variational or mode-based approximate inferences will understate posterior…

统计方法学 · 统计学 2021-11-19 Yuling Yao , Aki Vehtari , Andrew Gelman

Nested sampling is an increasingly popular technique for Bayesian computation, in particular for multimodal, degenerate problems of moderate to high dimensionality. Without appropriate settings, however, nested sampling software may fail to…

统计计算 · 统计学 2019-01-23 Edward Higson , Will Handley , Mike Hobson , Anthony Lasenby

Markov Chain Monte Carlo (MCMC) methods have revolutionised Bayesian data analysis over the years by making the direct computation of posterior probability densities feasible on modern workstations. However, the calculation of the prior…

天体物理仪器与方法 · 物理学 2009-11-13 Rutger van Haasteren

Since its debut by John Skilling in 2004, nested sampling has proven a valuable tool to the scientist, providing hypothesis evidence calculations and parameter inference for complicated posterior distributions, particularly in the field of…

天体物理仪器与方法 · 物理学 2021-01-01 Joshua G. Albert

The posterior probability distribution for a set of model parameters encodes all that the data have to tell us in the context of a given model; it is the fundamental quantity for Bayesian parameter estimation. In order to infer the…

天体物理仪器与方法 · 物理学 2015-06-16 Rupert Allison , Joanna Dunkley

We review Skilling's nested sampling (NS) algorithm for Bayesian inference and more broadly multi-dimensional integration. After recapitulating the principles of NS, we survey developments in implementing efficient NS algorithms in practice…

Most applications of Bayesian Inference for parameter estimation and model selection in astrophysics involve the use of Monte Carlo techniques such as Markov Chain Monte Carlo (MCMC) and nested sampling. However, these techniques are time…

天体物理仪器与方法 · 物理学 2022-01-26 Geetakrishnasai Gunapati , Anirudh Jain , P. K. Srijith , Shantanu Desai

In many inference problems, the evaluation of complex and costly models is often required. In this context, Bayesian methods have become very popular in several fields over the last years, in order to obtain parameter inversion, model…

计算工程、金融与科学 · 计算机科学 2021-07-21 Luca Martino , Víctor Elvira , Javier López-Santiago , Gustau Camps-Valls
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