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Several real-world and abstract structures and systems are characterized by marked hierarchy to the point of being expressed as trees. Because the study of these entities often involves sampling (or discovering) the tree nodes in a specific…

物理与社会 · 物理学 2022-04-18 Alexandre Benatti , Luciano da F. Costa

A pebble tree is an ordered tree where each node receives some colored pebbles, in such a way that each unary node receives at least one pebble, and each subtree has either one more or as many leaves as pebbles of each color. We show that…

组合数学 · 数学 2025-12-12 Vincent Pilaud

In this work, we answer an open problem in the study of phylogenetic networks. Phylogenetic trees are rooted binary trees in which all edges are directed away from the root, whereas phylogenetic networks are rooted acyclic digraphs. For the…

种群与进化 · 定量生物学 2015-11-12 Andreas D. M. Gunawan , Bhaskar DasGupta , Louxin Zhang

We introduce a new phylogenetic reconstruction algorithm which, unlike most previous rigorous inference techniques, does not rely on assumptions regarding the branch lengths or the depth of the tree. The algorithm returns a forest which is…

种群与进化 · 定量生物学 2011-09-30 Constantinos Daskalakis , Elchanan Mossel , Sebastien Roch

The problem of reconstructing evolutionary trees or phylogenies is of great interest in computational biology. A popular model for this problem assumes that we are given the set of leaves (current species) of an unknown binary tree and the…

数据结构与算法 · 计算机科学 2022-06-16 Eshwar Ram Arunachaleswaran , Anindya De , Sampath Kannan

Levy-Longo Trees and Bohm Trees are the best known tree structures on the {\lambda}-calculus. We give general conditions under which an encoding of the {\lambda}-calculus into the {\pi}-calculus is sound and complete with respect to such…

计算机科学中的逻辑 · 计算机科学 2023-06-22 Davide Sangiorgi , Xian Xu

In this paper, we give a new representation of the Fibonacci numbers. This is achieved using Fibonacci trees. With the help of this representation, the nth Fibonacci number can be calculated without having any knowledge about the previous…

组合数学 · 数学 2013-02-28 Indhumathi Raman

To most mathematicians and computer scientists the word ``tree'' conjures up, in addition to the usual image, the image of a connected graph with no circuits. In the last few years various types of trees have been the subject of much…

群论 · 数学 2016-09-06 John W. Morgan

The Tribonacci sequence $\mathbb{T}$ is the fixed point of the substitution $\sigma(a,b,c)=(ab,ac,a)$. In this note, we get the explicit expressions of all squares, and then establish the tree structure of the positions of repeated squares…

动力系统 · 数学 2016-05-17 Yuke Huang , Zhiying Wen

Understanding the evolution of a set of genes or species is a fundamental problem in evolutionary biology. The problem we study here takes as input a set of trees describing {possibly discordant} evolutionary scenarios for a given set of…

数据结构与算法 · 计算机科学 2019-07-10 Cedric Chauve , Mark Jones , Manuel Lafond , Céline Scornavacca , Mathias Weller

One of the main virtues of trees is to represent formal solutions of various functional equations which can be cast in the form of fixed point problems. Basic examples include differential equations and functional (Lagrange) inversion in…

组合数学 · 数学 2013-02-12 Florent Hivert , Jean-Christophe Novelli , Jean-Yves Thibon

Let $T$ be a tree, we show that the null space of the adjacency matrix of $T$ has relevant information about the structure of $T$. We introduce the Null Decomposition of trees, and use it in order to get formulas for independence number and…

组合数学 · 数学 2017-08-04 Daniel A. Jaume , Gonzalo Molina

Trees are partial orders in which every element has a linearly ordered set of predecessors. Here we initiate the exploration of the structural theory of trees with the study of different notions of \emph{branching in trees} and of…

组合数学 · 数学 2023-01-18 Valentin Goranko , Ruaan Kellerman , Alberto Zanardo

Puzzle solving is a difficult problem in its own right, even when the pieces are all square and build up a natural image. But what if these ideal conditions do not hold? One such application domain is archaeology, where restoring an…

计算机视觉与模式识别 · 计算机科学 2018-12-31 Niv Derech , Ayellet Tal , Ilan Shimshoni

We apply the theory of markov random fields on trees to derive a phase transition in the number of samples needed in order to reconstruct phylogenies. We consider the Cavender-Farris-Neyman model of evolution on trees, where all the inner…

概率论 · 数学 2007-05-23 Elchanan Mossel

Disjoint-Set forests, consisting of Union-Find trees are data structures having a widespread practical application due to their efficiency. Despite them being well-known, no exact structural characterization of these trees is known (such a…

计算复杂性 · 计算机科学 2017-01-06 Kitti Gelle , Szabolcs Ivan

We propose a new arithmetic for non-empty rooted unordered trees simply called trees. After discussing tree representation and enumeration, we define the operations of tree addition, multiplication and stretch, prove their properties, and…

离散数学 · 计算机科学 2016-02-02 Fabrizio Luccio

In this note we analyze the performance of a simple root-finding algorithm in uniform attachment trees. The leaf-stripping algorithm recursively removes all leaves of the tree for a carefully chosen number of rounds. We show that, with…

We consider the process of uncovering the vertices of a random labeled tree according to their labels. First, a labeled tree with $n$ vertices is generated uniformly at random. Thereafter, the vertices are uncovered one by one, in order of…

概率论 · 数学 2023-01-03 Benjamin Hackl , Alois Panholzer , Stephan Wagner

The uncertainty of multidimensional shift spaces draws attracted attention of researchers. For example, the emptiness problem is undecidable; there exist aperiodic shifts of finite type; there is a nonempty shift of finite type exhibiting…

动力系统 · 数学 2022-07-20 Jung-Chao Ban , Chih-Hung Chang