Related papers: Cyclic sieving phenomena for trees and tree-rooted…
In the critical beta-splitting model of a random $n$-leaf rooted tree, clades are recursively split into sub-clades, and a clade of $m$ leaves is split into sub-clades containing $i$ and $m-i$ leaves with probabilities $\propto 1/(i(m-i))$.…
We show that the set R(w_0) of reduced expressions for the longest element in the hyperoctahedral group exhibits the cyclic sieving phenomenon. More specifically, R(w_0) possesses a natural cyclic action given by moving the first letter of…
Periodic trees are combinatorial structures which are in bijection with cluster tilting objects in cluster categories of affine type $\tilde{A}_{n-1}$. The internal edges of the tree encode the $c$-vectors corresponding to the cluster…
Recently, the minimum number of reticulation events that is required to simultaneously embed a collection P of rooted binary phylogenetic trees into a so-called temporal network has been characterized in terms of cherry-picking sequences.…
We prove that any group acting faithfully on a bifoliated plane while preserving the orientations of both foliations is left-orderable. The proof utilizes a construction of a linear order on the set of ends of the leaf spaces, which takes…
We introduce the zip tree, a form of randomized binary search tree that integrates previous ideas into one practical, performant, and pleasant-to-implement package. A zip tree is a binary search tree in which each node has a numeric rank…
Phylogenetic networks generalize phylogenetic trees by allowing the modelization of events of reticulate evolution. Among the different kinds of phylogenetic networks that have been proposed in the literature, the subclass of binary…
A cyclic order may be thought of informally as a way to seat people around a table, perhaps for a game of chance or for dinner. Given a set of agents such as $\{A,B,C\}$, we can formalize this by defining a cyclic order as a permutation or…
The monadic second-order theory of trees allows quantification over elements and over arbitrary subsets. We classify the class of trees with respect to the question: does a tree T have a definable choice function (by a monadic formula with…
Neutral macroevolutionary models, such as the Yule model, give rise to a probability distribution on the set of discrete rooted binary trees over a given leaf set. Such models can provide a signal as to the approximate location of the root…
We show that families of action graphs, with initial graphs which are linear of varying length, give rise to self-convolutions of the Catalan sequence. We prove this result via a comparison with planar rooted forests with a fixed number of…
The main goal of this paper is to describe a new pruning method for solving decision trees and game trees. The pruning method for decision trees suggests a slight variant of decision trees that we call scenario trees. In scenario trees, we…
A flip in a plane spanning tree $T$ is the operation of removing one edge from $T$ and adding another edge such that the resulting structure is again a plane spanning tree. For trees on a set of points in convex position we study two…
In the critical beta-splitting model of a random $n$-leaf rooted tree, clades are recursively (from the root) split into sub-clades, and a clade of $m$ leaves is split into sub-clades containing $i$ and $m-i$ leaves with probabilities…
In this thesis the properties of two kinds of non-uniform random recursive trees are studied. In the first model weights are assigned to each node, thus altering the attachment probabilities. We will call these trees weighted recursive…
To a definable subset of Z_p^n (or to a scheme of finite type over Z_p) one can associate a tree in a natural way. It is known that the corresponding Poincare series P(X) = \sum_i N_i X^i is rational, where N_i is the number of nodes of the…
We consider three bivariate polynomial invariants $P$, $A$, and $S$ for rooted trees, as well as a trivariate polynomial invariant $M$. These invariants are motivated by random destruction processes such as the random cutting model or site…
In this paper, we study factorizations of cycles. The main result is that under certain condition, the number of ways to factor a $d$-cycle into a product of cycles of prescribed lengths is $d^{r-2}.$ To prove our result, we first define a…
We introduce a notion of finite sampling consistency for phylogenetic trees and show that the set of finitely sampling consistent and exchangeable distributions on n leaf phylogenetic trees is a polytope. We use this polytope to show that…
Based on computational experiments, Jim Propp and Vic Reiner suspected that there might exist a sequence of combinatorial objects $X_n$, each carrying a natural action of the cyclic group $C_{n-1}$ of order $n-1$ such that the triple…