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As a medium for cold data storage, DNA stands out as it promises significant gains in storage capacity and lifetime. However, it comes with its own data processing challenges to overcome. Constrained codes over the DNA alphabet…

Information Theory · Computer Science 2025-10-08 Canberk İrimağzı , Ahmed Hareedy

In the current era, DeoxyriboNucleic Acid (DNA) based data storage emerges as an intriguing approach, garnering substantial academic interest and investigation. This paper introduces a novel deep joint source-channel coding (DJSCC) scheme…

Emerging Technologies · Computer Science 2023-11-03 Wenfeng Wu , Luping Xiang , Qiang Liu , Kun Yang

DNA is emerging as an increasingly attractive medium for data storage due to a number of important and unique advantages it offers, most notably the unprecedented durability and density. While the technology is evolving rapidly, the…

Emerging Technologies · Computer Science 2022-05-03 Dehui Lin , Yasamin Tabatabaee , Yash Pote , Djordje Jevdjic

Near-term quantum communication protocols suffer inevitably from channel noises, whose alleviation has been mostly attempted with resources such as multiparty entanglement or sophisticated experimental techniques. Generation of multiparty…

Quantum Physics · Physics 2023-02-21 Rajni Bala , Sooryansh Asthana , V. Ravishankar

Error correction code is a major part of the communication physical layer, ensuring the reliable transfer of data over noisy channels. Recently, neural decoders were shown to outperform classical decoding techniques. However, the existing…

Machine Learning · Computer Science 2022-03-30 Yoni Choukroun , Lior Wolf

Due to their sequential nature, traditional DNA synthesis methods are expensive in terms of time and resources. They also fabricate multiple copies of the same strand, introducing redundancy. This redundancy can be leveraged to enhance the…

Information Theory · Computer Science 2025-10-29 Frederik Walter , Yonatan Yehezkeally

It has been an open question in deep learning if fault-tolerant computation is possible: can arbitrarily reliable computation be achieved using only unreliable neurons? In the grid cells of the mammalian cortex, analog error correction…

Machine Learning · Computer Science 2025-03-26 Alexander Zlokapa , Andrew K. Tan , John M. Martyn , Ila R. Fiete , Max Tegmark , Isaac L. Chuang

Composite DNA is a recent method to increase the base alphabet size in DNA-based data storage.This paper models synthesizing and sequencing of composite DNA and introduces coding techniques to correct substitutions, losses of entire…

Information Theory · Computer Science 2025-10-29 Frederik Walter , Omer Sabary , Antonia Wachter-Zeh , Eitan Yaakobi

Noisy labels are ubiquitous in real-world datasets, which poses a challenge for robustly training deep neural networks (DNNs) as DNNs usually have the high capacity to memorize the noisy labels. In this paper, we find that the test accuracy…

Machine Learning · Computer Science 2019-05-14 Pengfei Chen , Benben Liao , Guangyong Chen , Shengyu Zhang

Designing encoding and decoding circuits to reliably send messages over many uses of a noisy channel is a central problem in communication theory. When studying the optimal transmission rates achievable with asymptotically vanishing error…

Quantum Physics · Physics 2024-11-07 Matthias Christandl , Alexander Müller-Hermes

As the global need for large-scale data storage is rising exponentially, existing storage technologies are approaching their theoretical and functional limits in terms of density and energy consumption, making DNA based storage a potential…

Emerging Technologies · Computer Science 2021-10-12 Yotam Nahum , Eyar Ben-Tolila , Leon Anavy

We propose a new coding scheme, called the delayed coding (DC) scheme, for channels with insertion, deletion, and substitution (IDS) errors. The proposed scheme employs delayed encoding and non-iterative detection and decoding strategies to…

Information Theory · Computer Science 2022-05-25 Ryo Shibata , Hiroyuki Yashima

An index coding problem arises when there is a single source with a number of messages and multiple receivers each wanting a subset of messages and knowing a different set of messages a priori. The noiseless Index Coding Problem is to…

Information Theory · Computer Science 2015-10-13 Kavitha R. , Niranjana Ambadi , B. Sundar Rajan

We establish the capacity of a class of communication channels introduced in [1]. The $n$-letter input from a finite alphabet is passed through a discrete memoryless channel $P_{Z|X}$ and then the output $n$-letter sequence is uniformly…

Information Theory · Computer Science 2023-10-30 Jennifer Tang , Yury Polyanskiy

Living in the age of the digital media explosion, the amount of data that is being stored increases dramatically. However, even if existing storage systems suggest efficiency in capacity, they are lacking in durability. Hard disks, flash,…

Image and Video Processing · Electrical Eng. & Systems 2019-04-08 Melpomeni Dimopoulou , Marc Antonini , Pascal Barbry , Raja Appuswamy

The yearly global production of data is growing exponentially, outpacing the capacity of existing storage media, such as tape and disk, and surpassing our ability to store it. DNA storage - the representation of arbitrary information as…

Quantitative Methods · Quantitative Biology 2023-10-04 Thomas Heinis , Roman Sokolovskii , Jamie J. Alnasir

In recent years, deep neural networks (DNNs) have gained remarkable achievement in computer vision tasks, and the success of DNNs often depends greatly on the richness of data. However, the acquisition process of data and high-quality…

Computer Vision and Pattern Recognition · Computer Science 2024-04-08 Mengting Li , Chuang Zhu

A general quantum noisy channel is analyzed, wherein the transmitted qubits may experience symmetry-breaking decoherence, along with memory effects. We find the optimal basis not to be fully entangled, but a combination of factorized and…

Quantum Physics · Physics 2015-05-13 Goren Gordon , Gershon Kurizki

Motivated by communication systems with constrained complexity, we consider the problem of input symbol selection for discrete memoryless channels (DMCs). Given a DMC, the goal is to find a subset of its input alphabet, so that the optimal…

Information Theory · Computer Science 2024-07-02 Maximilian Egger , Rawad Bitar , Antonia Wachter-Zeh , Deniz Gündüz , Nir Weinberger

We consider distributed computations between two parties carried out over a noisy channel that may erase messages. Following a noise model proposed by Dani et al. (2018), the noise level observed by the parties during the computation in our…

Data Structures and Algorithms · Computer Science 2019-09-17 Ran Gelles , Siddharth Iyer
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