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In this paper, we study error-correcting codes for the storage of data in synthetic deoxyribonucleic acid (DNA). We investigate a storage model where data is represented by an unordered set of $M$ sequences, each of length $L$. Errors…

Information Theory · Computer Science 2018-05-10 Andreas Lenz , Paul H. Siegel , Antonia Wachter-Zeh , Eitan Yaakobi

We study the capacity of discrete memoryless many-to-one interference channels, i.e., K user interference channels where only one receiver faces interference. For a class of many-to-one interference channels, we identify a noisy…

Information Theory · Computer Science 2009-12-17 Viveck R. Cadambe , Syed A. Jafar

In this paper, we first consider a channel that is contaminated by two independent Gaussian noises $S ~ N(0,Q)$ and $Z_0 ~ N(0,N_0)$. The capacity of this channel is computed when independent noisy versions of $S$ are known to the…

Information Theory · Computer Science 2009-01-21 Yong Peng , Dinesh Rajan

DNA-based storage is an emerging technology that enables digital information to be archived in DNA molecules. This method enjoys major advantages over magnetic and optical storage solutions such as exceptional information density, enhanced…

Information Theory · Computer Science 2024-03-13 Daniella Bar-Lev , Itai Orr , Omer Sabary , Tuvi Etzion , Eitan Yaakobi

In this paper, we propose a novel iterative encoding algorithm for DNA storage to satisfy both the GC balance and run-length constraints using a greedy algorithm. DNA strands with run-length more than three and the GC balance ratio far from…

Information Theory · Computer Science 2023-01-04 Seong-Joon Park , Yongwoo Lee , Jong-Seon No

In the field of interactive coding, two or more parties wish to carry out a distributed computation over a communication network that may be noisy. The ultimate goal is to develop efficient coding schemes that can tolerate a high level of…

Data Structures and Algorithms · Computer Science 2022-08-04 Ran Gelles , Yael T. Kalai , Govind Ramnarayan

Storing digital data in synthetic DNA faces challenges in ensuring data reliability in the presence of edit errors--deletions, insertions, and substitutions--that occur randomly during various stages of the storage process. Current…

Information Theory · Computer Science 2025-09-11 Serge Kas Hanna

Noisy channels are a valuable resource from a cryptographic point of view. They can be used for exchanging secret-keys as well as realizing other cryptographic primitives such as commitment and oblivious transfer. To be really useful, noisy…

Cryptography and Security · Computer Science 2019-05-28 Claude Crépeau , Rafael Dowsley , Anderson C. A. Nascimento

Motivated by mutation processes occurring in in-vivo DNA-storage applications, a channel that mutates stored strings by duplicating substrings as well as substituting symbols is studied. Two models of such a channel are considered: one in…

Information Theory · Computer Science 2020-07-01 Yuanyuan Tang , Yonatan Yehezkeally , Moshe Schwartz , Farzad Farnoud

There is an emerging trend to leverage noisy image datasets in many visual recognition tasks. However, the label noise among the datasets severely degenerates the \mbox{performance of deep} learning approaches. Recently, one mainstream is…

Computer Vision and Pattern Recognition · Computer Science 2017-11-03 Jiangchao Yao , Jiajie Wang , Ivor Tsang , Ya Zhang , Jun Sun , Chengqi Zhang , Rui Zhang

Synthetic DNA can in principle be used for the archival storage of arbitrary data. Because errors are introduced during DNA synthesis, storage, and sequencing, an error-correcting code (ECC) is necessary for error-free recovery of the data.…

Quantitative Methods · Quantitative Biology 2018-12-05 William H. Press , John A. Hawkins

Deep Neural Networks (DNNs) are a revolutionary force in the ongoing information revolution, and yet their intrinsic properties remain a mystery. In particular, it is widely known that DNNs are highly sensitive to noise, whether adversarial…

Machine Learning · Computer Science 2020-05-01 Netanel Raviv , Siddharth Jain , Pulakesh Upadhyaya , Jehoshua Bruck , Anxiao Jiang

Secure storage of noisy data for authentication purposes usually involves the use of error correcting codes. We propose a new model scenario involving burst errors and present for that several constructions.

Information Theory · Computer Science 2012-05-24 Felix Fontein , Kyle Marshall , Joachim Rosenthal , Davide Schipani , Anna-Lena Trautmann

Departing from traditional communication theory where decoding algorithms are assumed to perform without error, a system where noise perturbs both computational devices and communication channels is considered here. This paper studies…

Information Theory · Computer Science 2010-05-31 Lav R. Varshney

To collect large scale annotated data, it is inevitable to introduce label noise, i.e., incorrect class labels. To be robust against label noise, many successful methods rely on the noisy classifiers (i.e., models trained on the noisy…

Computer Vision and Pattern Recognition · Computer Science 2020-11-23 Songzhu Zheng , Pengxiang Wu , Aman Goswami , Mayank Goswami , Dimitris Metaxas , Chao Chen

We consider the problem of reliable communication over non-binary insertion/deletion channels where symbols are randomly deleted from or inserted in the transmitted sequence and all symbols are corrupted by additive white Gaussian noise. To…

Information Theory · Computer Science 2012-04-17 Raman Yazdani , Masoud Ardakani

In coding theory, handling errors that occur when symbols are inserted or deleted from a transmitted message is a long-standing challenge. Optimising redundancy for insertion and deletion channels remains a key open problem with significant…

Information Theory · Computer Science 2026-02-02 Anamika Singh , Abhay Kumar Singh

Channel capacities quantify the optimal rates of sending information reliably over noisy channels. Usually, the study of capacities assumes that the circuits which sender and receiver use for encoding and decoding consist of perfectly…

Quantum Physics · Physics 2024-04-15 Paula Belzig , Matthias Christandl , Alexander Müller-Hermes

DNA emerges as a promising medium for the exponential growth of digital data due to its density and durability. This study extends recent research by addressing the \emph{coverage depth problem} in practical scenarios, exploring optimal…

Information Theory · Computer Science 2024-02-01 Hadas Abraham , Rayn Gabrys , Eitan Yaakobi

Reconstruction codes are generalizations of error-correcting codes that can correct errors by a given number of noisy reads. The study of such codes was initiated by Levenshtein in 2001 and developed recently due to applications in modern…

Information Theory · Computer Science 2023-02-21 Zuo Ye , Xin Liu , Xiande Zhang , Gennian Ge