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We demonstrate that primordial magnetic fields (PMF) play a decisive role in the braneworld baryogenesis scenario of [Phys. Rev. D $\textbf{110}$, 023520 (2024)], where C/CP violation arises from the coupling of visible and hidden…

High Energy Physics - Phenomenology · Physics 2026-01-09 Michaël Sarrazin

Breast cancer is one of the most challenging global health problems among women. This study investigates the intricate breast tumor microenvironment (TME) dynamics utilizing data from Mammary-specific Polyomavirus Middle T Antigen…

Quantitative Methods · Quantitative Biology 2024-04-11 Navid Mohammad Mirzaei , Panayotis G. Kevrekidis , Leili Shahriyari

Morphogen profiles play a vital role in biology by specifying position in embryonic development. However, the factors that influence the shape of a morphogen profile remain poorly understood. Since morphogens should provide precise…

Molecular Networks · Quantitative Biology 2009-11-27 Timothy E Saunders , Martin Howard

We propose a physical model for developmental process at cellular level to discuss the mechanism of epigenetic landscape. In our simplified model, a minimal model, the network of the interaction among cells generates the landscape…

Cell Behavior · Quantitative Biology 2014-02-04 Motoki Nakagawa , Osamu Narikiyo

Embryonic stem cells (ESC) have the potential to self-renew indefinitely and to differentiate into any of the three germ layers. The molecular mechanisms for self-renewal, maintenance of pluripotency and lineage specification are poorly…

Genomics · Quantitative Biology 2011-01-11 Florian Markowetz , Klaas W Mulder , Edoardo M Airoldi , Ihor R Lemischka , Olga G Troyanskaya

The first cell fate decisions in the developing fly embryo are made very rapidly : hunchback genes decide in a few minutes whether a given nucleus follows the anterior or the posterior developmental blueprint by reading out the positional…

Molecular Networks · Quantitative Biology 2019-06-24 Jonathan Desponds , Massimo Vergassola , Aleksandra M. Walczak

A major open problem in biophysics is to understand the highly heterogeneous transport of many structures inside living cells, such as endosomes. We find that mathematically it is described by spatio-temporal heterogeneous fractional…

Subcellular Processes · Quantitative Biology 2021-07-20 Nickolay Korabel , Daniel Han , Alessandro Taloni , Gianni Pagnini , Sergei Fedotov , Viki Allan , Thomas Andrew Waigh

Non-invasive morphological assessment is the cornerstone of oocyte and embryo selection in assisted reproductive technology, yet clinical practice remains limited by two-dimensional, qualitative microscopy. While three-dimensional (3D)…

The extracellular matrix (ECM) is a highly complex structure through which biochemical and mechanical signals are transmitted. In processes of cell migration, the ECM also acts as a scaffold, providing structural support to cells as well as…

In conventional clinical in-vitro fertilization practices embryos are transferred either at the cleavage or blastocyst stages of development. Cleavage stage transfers, particularly, are beneficial for patients with relatively poor prognosis…

Cellular differentiation is governed by gene regulatory networks, the high-dimensional stochastic biochemical systems that determine the transcriptional landscape and mediate cellular responses to signals and perturbations. Although…

Molecular Networks · Quantitative Biology 2026-04-29 Suryanarayana Maddu , Victor Chardès , Michael J. Shelley

Due to inherent noise in intracellular networks cellular decisions can be random, so genetically identical cells can display different phenotypic behavior even in identical environments. Most previous work in understanding the…

Molecular Networks · Quantitative Biology 2015-06-15 Michael Assaf , Elijah Roberts , Zaida Luthey-Schulten , Nigel Goldenfeld

In many developmental systems, cells differentiate into a tissue by reading out morphogen concentration fields, a process fundamentally limited by noise. How much can the precision of this process be improved by nonlocal information, e.g.,…

Biological Physics · Physics 2025-12-24 Alex Chen Yi Zhang , Pablo Mateu Hoyos , David Brückner , Gašper Tkačik

The fundamental biological processes of development of tissues and organs in multicellular organisms is governed by various signaling molecules, which are called morphogens. It is known that spatial and temporal variations in concentration…

Biological Physics · Physics 2015-04-07 Behnaz Bozorgui , Hamid Teimouri , Anatoly B. Kolomeisky

The work is devoted to the analysis of cell population dynamics where cells make a choice between differentiation and apoptosis. This choice is based on the values of intracellular proteins whose concentrations are described by a system of…

Cell Behavior · Quantitative Biology 2016-03-30 Malay Banerjee , Vitaly Volpert

Recent advances in AI foundation models have significant potential for lightening the clinical workload by mimicking the comprehensive and multi-faceted approaches used by medical professionals. In the field of radiation oncology, the…

Computer Vision and Pattern Recognition · Computer Science 2025-05-29 Kwanyoung Kim , Yujin Oh , Sangjoon Park , Hwa Kyung Byun , Joongyo Lee , Jin Sung Kim , Yong Bae Kim , Jong Chul Ye

Text-to-image diffusion models exhibit remarkable generative capabilities, yet their internal operations remain opaque, particularly when handling prompts that are not fully descriptive. In such scenarios, models must make implicit…

Computer Vision and Pattern Recognition · Computer Science 2026-04-08 Katarzyna Zaleska , Łukasz Popek , Monika Wysoczańska , Kamil Deja

Primary tumors often emerge within genetically altered fields of premalignant cells that appear histologically normal but have a high chance of progression to malignancy. Clinical observations have suggested that these premalignant fields…

Populations and Evolution · Quantitative Biology 2013-09-06 Jasmine Foo , Kevin Leder , Marc Ryser

The proper functioning of multicellular organisms requires the robust establishment of precise proportions between distinct cell-types. This developmental differentiation process typically involves intracellular regulatory and stochastic…

Cell Behavior · Quantitative Biology 2016-06-22 Benjamin Pfeuty , Kunihiko Kaneko

Extensive pre-training with large data is indispensable for downstream geometry and semantic visual perception tasks. Thanks to large-scale text-to-image (T2I) pretraining, recent works show promising results by simply fine-tuning T2I…

Computer Vision and Pattern Recognition · Computer Science 2024-12-03 Guangkai Xu , Yongtao Ge , Mingyu Liu , Chengxiang Fan , Kangyang Xie , Zhiyue Zhao , Hao Chen , Chunhua Shen