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In preimplantation mammalian embryos, the second cell fate decision introduces spatial patterns of embryonic and extra-embryonic precursor cells. The transcription factors NANOG and GATA6 are the earliest markers for the two cell types and…

Biological Physics · Physics 2021-07-12 Simon Schardt , Sabine C. Fischer

Pluripotent embryonic stem cells are of paramount importance for biomedical research thanks to their innate ability for self-renewal and differentiation into all major cell lines. The fateful decision to exit or remain in the pluripotent…

Molecular Networks · Quantitative Biology 2018-07-04 Yen Ting Lin , Peter G. Hufton , Esther J. Lee , Davit A. Potoyan

Automating human preimplantation embryo grading offers the potential for higher success rates with in vitro fertilization (IVF) by providing new quantitative and objective measures of embryo quality. Current IVF procedures typically use…

Image and Video Processing · Electrical Eng. & Systems 2020-08-21 Md Yousuf Harun , M Arifur Rahman , Joshua Mellinger , Willy Chang , Thomas Huang , Brienne Walker , Kristen Hori , Aaron T. Ohta

Functional development of affective and reward circuits, cognition and response inhibition later in life exhibits vulnerability periods during gestation and early childhood. Extensive evidence supports the model that exposure to stressors…

Quantitative Methods · Quantitative Biology 2021-02-26 Marta C. Antonelli , Martin G. Frasch , Mercedes Rumi , Ritika Sharma , Peter Zimmermann , Maria Sol Molinet , Silvia M. Lobmaier

Artificial intelligence has recently shown promise in automated embryo selection for In-Vitro Fertilization (IVF). However, current approaches either address partial embryo evaluation lacking holistic quality assessment or target clinical…

Computer Vision and Pattern Recognition · Computer Science 2025-06-06 Yong Sun , Yipeng Wang , Junyu Shi , Zhiyuan Zhang , Yanmei Xiao , Lei Zhu , Manxi Jiang , Qiang Nie

The recently inferred variations in the stellar initial mass function (IMF) among local high-mass early-type galaxies may require a reinterpretation of observations of galaxy populations and may have important consequences for the…

Astrophysics of Galaxies · Physics 2018-07-17 Christopher Barber , Robert A. Crain , Joop Schaye

Source localization based on electroencephalography (EEG) has become a widely used neuroimagining technique. However its precision has been shown to be very dependent on how accurately the brain, head and scalp can be electrically modeled…

Medical Physics · Physics 2020-04-22 Lyes Rahmouni , Adrien Merlini , Axelle Pillain , Francesco P. Andriulli

A model to describe the arising of new structures in an initial homogeneous biological system is proposed. The essay is motivated by the intention to work on a non-equilibrium situation grouping together several mechanisms and processes as:…

Biological Physics · Physics 2007-05-23 P. C. T. Dajello , P. R. Hauser

Fluctuations play a critical role in cosmology. They are relevant across a range of phenomena from the dynamics of inflation to the formation of structure. In many cases, these fluctuations are coarse grained and follow a Gaussian…

High Energy Physics - Theory · Physics 2023-05-10 Timothy Cohen , Daniel Green , Akhil Premkumar

The stellar initial mass function (IMF) plays a crucial role in determining the number of surviving stars in galaxies, the chemical composition of the interstellar medium, and the distribution of light in galaxies. A key unsolved question…

Initial residual stress is omnipresent in biological tissues and soft matter, and can affect growth-induced pattern selection significantly. Here we demonstrate this effect experimentally by letting soft tubes grow in the presence or…

Soft Condensed Matter · Physics 2020-09-11 Yangkun Du , Chaofeng Lü , Congshan Liu , Zilong Han , Jian Li , Weiqi Chen , Shaoxing Qua , Michel Destrade

The metazoan body plan is established during early embryogenesis via collective cell rearrangements and evolutionarily conserved gene networks, as part of a process commonly referred to as gastrulation. While substantial progress has been…

Populations and Evolution · Quantitative Biology 2020-11-24 Kerim Anlas , Vikas Trivedi

Recent spatially-resolved observations of massive early-type galaxies (ETGs) have uncovered evidence for radial gradients of the stellar initial mass function (IMF), ranging from super-Salpeter IMFs in the centre to Milky Way-like beyond…

Astrophysics of Galaxies · Physics 2018-11-06 Christopher Barber , Joop Schaye , Robert A. Crain

Primary lymphoid follicles in secondary lymphoid tissue of mammals are the backbone for the formation of follicular dendritic cell networks. These are important for germinal center reactions. In the context of organogenesis molecular…

Tissues and Organs · Quantitative Biology 2007-05-23 Tilo Beyer , Michael Meyer-Hermann

Lumen formation plays an essential role in the morphogenesis of tissues during development. Here we review the physical principles that play a role in the growth and coarsening of lumens. Solute pumping by the cell, hydraulic flows driven…

Soft Condensed Matter · Physics 2021-07-14 Alejandro Torres-Sánchez , Max Kerr Winter , Guillaume Salbreux

We discuss the physical mechanisms that promote or suppress the nucleation of a fluid-filled lumen inside a cell assembly or a tissue. We discuss lumen formation in a continuum theory of tissue material properties in which the tissue is…

Biological Physics · Physics 2019-09-27 Charlie Duclut , Niladri Sarkar , Jacques Prost , Frank Jülicher

In order to better understand the mechanisms underlying the physiology of vision, it is a necessary prerequisite to know the embryological bases of eye development and associated tissues. Eye formation starts during the fourth week of human…

Cell Behavior · Quantitative Biology 2017-09-14 Sophie Creuzet , Heather Etchevers

The process of morphogenesis is an evolution of the shape of an organism together with the differentiation of its parts. This process encompasses numerous biological processes ranging from embryogenesis to regeneration following crisis such…

Other Quantitative Biology · Quantitative Biology 2019-09-23 N. Bessonov , O. Butuzova , A. Minarsky , R. Penner , C. Soule , A. Tosenberger , N. Morozova

The release of hydrophilic solutes from micron scale particulate formulations can be understood as an interfacial transport problem in which diffusion across a heterogeneous amphiphilic coating competes with dissolution and convective…

Soft Condensed Matter · Physics 2026-01-01 Joonggwon Kim , Dogyun Byeon