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In an effort to provide regional decision support for the public healthcare, we design a data-driven compartment-based model of COVID-19 in Sweden. From national hospital statistics we derive parameter priors, and we develop linear…

Applications · Statistics 2023-07-31 Robin Marin , Håkan Runvik , Alexander Medvedev , Stefan Engblom

We introduce a Bayesian sequential data assimilation method for COVID-19 forecasting. It is assumed that suitable transmission, epidemic and observation models are available and previously validated and the transmission and epidemic models…

We present a simple technique to compare the development of the Covid-19 epidemic in different regions, based only on the time series of confirmed cases. Weekly new infections, taken for every day, are interpreted as infection potential of…

Populations and Evolution · Quantitative Biology 2020-06-04 Christoph Bandt

The phenomenological mathematical model of COVID-19 spreading is proposed for large countries with geographical differentiation of population density. According to the model COVID-19 spreading takes the form of several spatio-temporal waves…

Biological Physics · Physics 2020-12-14 P. S. Grinchuk , S. P. Fisenko

We present an extension of the Li and Lee model to quantify mortality in five European countries during the COVID-19 pandemic. The first two factors are used to model the pre-COVID mortality, with the first layer modelling the common trend…

Applications · Statistics 2022-09-15 Frank van Berkum , Bertrand Melenberg , Michel Vellekoop

We propose a novel methodology for estimating the epidemiological parameters of a modified SIRD model (acronym of Susceptible, Infected, Recovered and Deceased individuals) and perform a short-term forecast of SARS-CoV-2 virus spread. We…

The investment of time and resources for better strategies and methodologies to tackle a potential pandemic is key to deal with potential outbreaks of new variants or other viruses in the future. In this work, we recreated the scene of a…

Machine Learning · Computer Science 2021-04-22 Andrés L. Suárez-Cetrulo , Ankit Kumar , Luis Miralles-Pechuán

It is widely accepted that the number of reported cases during the first stages of the COVID-19 pandemic severely underestimates the number of actual cases. We leverage delay embedding theorems of Whitney and Takens and use Gaussian Process…

Quantitative Methods · Quantitative Biology 2022-02-02 G. A. Kevrekidis , Z. Rapti , Y. Drossinos , P. G. Kevrekidis , M. A. Barmann , Q. Y. Chen , J. Cuevas-Maraver

Since the beginning of the COVID-19 pandemic, many dashboards have emerged as useful tools to monitor the evolution of the pandemic, inform the public, and assist governments in decision making. Our goal is to develop a globally applicable…

This paper investigates the impact of human activity and mobility (HAM) in the spreading dynamics of an epidemic. Specifically, it explores the interconnections between HAM and its effect on the early spread of the COVID-19 virus. During…

Physics and Society · Physics 2021-08-06 Shakib Mustavee , Shaurya Agarwal , Chinwendu Enyioha , Suddhasattwa Das

With the unfolding of the COVID-19 pandemic, mathematical modeling of epidemics has been perceived and used as a central element in understanding, predicting, and governing the pandemic event. However, soon it became clear that long term…

Populations and Evolution · Quantitative Biology 2020-07-09 Ziqi Wang , Marco Broccardo , Arnaud Mignan , Didier Sornette

The results of an alternative methodology for making predictions about the COVID-19 pandemic in Greece are presented. Instead of focusing on the various population profiles (subjected to instabilities introduced by the fitting process),…

Dynamical Systems · Mathematics 2023-12-13 Dimitris M. Manias , Dimitris G. Patsatzis , Dimitris A. Goussis

In this article we use the methods of functional data analysis to analyze the number of positive tests, deaths, convalescents, hospitalized and intensive care people during second and third wave of the COVID-19 pandemic in Poland. For this…

Applications · Statistics 2023-06-22 Patrycja Hęćka

For the last few years there has been a resurgence in the use of phenomenological growth models for predicting the early dynamics of infectious diseases. These models assume that time is a continuous variable whereas in the present…

Populations and Evolution · Quantitative Biology 2023-01-24 María T. Pérez-Maldonado , Julián Bravo-Castillero , Ricardo Mansilla , Rogelio O. Caballero-Pérez

We propose a general Bayesian approach to modeling epidemics such as COVID-19. The approach grew out of specific analyses conducted during the pandemic, in particular an analysis concerning the effects of non-pharmaceutical interventions…

Applications · Statistics 2021-01-01 Samir Bhatt , Neil Ferguson , Seth Flaxman , Axel Gandy , Swapnil Mishra , James A. Scott

In the present article a mathematical model is proposed to research the current coronavirus outbreak (SARS-CoV-2) in Paraguay, describing the multiple transmission paths in the infection dynamics, following the susceptible, exposed,…

Populations and Evolution · Quantitative Biology 2020-06-02 Juan A. Gonzalez Cuevas

This contribution analyzes the COVID-19 outbreak by comparably simple mathematical and numerical methods. The final goal is to predict the peak of the epidemic outbreak per country with a reliable technique. This is done by an algorithm…

Physics and Society · Physics 2020-05-15 Robert Schaback

The COVID-19 pandemic has emphasized the need for a robust understanding of epidemic models. Current models of epidemics are classified as either mechanistic or non-mechanistic: mechanistic models make explicit assumptions on the dynamics…

Machine Learning · Statistics 2022-01-14 Arnab Sarker , Ali Jadbabaie , Devavrat Shah

This work provides an overview on deterministic and stochastic models that have previously been proposed by us to study the transmission dynamics of the Coronavirus Disease 2019 (COVID-19) in Europe and USA. Briefly, we describe realistic…

Populations and Evolution · Quantitative Biology 2022-07-11 Giorgio Sonnino , Philippe Peeters , Pasquale Nardone

The need to forecast COVID-19 related variables continues to be pressing as the epidemic unfolds. Different efforts have been made, with compartmental models in epidemiology and statistical models such as AutoRegressive Integrated Moving…

Applications · Statistics 2020-10-07 Bahman Rostami-Tabar , Juan F. Rendon-Sanchez
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