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Detecting changes in COVID-19 disease transmission over time is a key indicator of epidemic growth.Near real-time monitoring of the pandemic growth is crucial for policy makers and public health officials who need to make informed decisions…

Applications · Statistics 2021-11-30 Luca Scrucca

In India the COVID-19 infected population has not yet been accurately established. As always in the early stages of any epidemic, the need to test serious cases first has meant that the population with asymptomatic or mild sub-clinical…

Populations and Evolution · Quantitative Biology 2020-04-09 Sourendu Gupta , R. Shankar

It is of vital importance to understand and track the dynamics of rapidly unfolding epidemics. The health and economic consequences of the current COVID-19 pandemic provide a poignant case. Here we point out that since they are based on…

Populations and Evolution · Quantitative Biology 2020-04-28 Z. Fodor , S. D. Katz , T. G. Kovacs

We demonstrate the ability of statistical data assimilation to identify the measurements required for accurate state and parameter estimation in an epidemiological model for the novel coronavirus disease COVID-19. Our context is an effort…

Populations and Evolution · Quantitative Biology 2020-08-04 Eve Armstrong , Manuela Runge , Jaline Gerardin

We propose a high dimensional Bayesian inference framework for learning heterogeneous dynamics of a COVID-19 model, with a specific application to the dynamics and severity of COVID-19 inside and outside long-term care (LTC) facilities. We…

Methodology · Statistics 2021-08-04 Peng Chen , Keyi Wu , Omar Ghattas

Despite the progress in medical data collection the actual burden of SARS-CoV-2 remains unknown due to under-ascertainment of cases. This was apparent in the acute phase of the pandemic and the use of reported deaths has been pointed out as…

Applications · Statistics 2023-07-13 Anastasia Chatzilena , Nikolaos Demiris , Konstantinos Kalogeropoulos

This paper addresses statistical modelling and forecasting of key indicators describing the severity of a developing pandemic, using routinely reported daily counts of infections, hospitalizations, deaths (both in and out of hospital), and…

Faced with the 2020 SARS-CoV2 epidemic, public health officials have been seeking models that could be used to predict not only the number of new cases but also the levels of hospitalisation, critical care and deaths. In this paper we…

Populations and Evolution · Quantitative Biology 2020-12-24 Jonathan Wells , Chris Robertson , Vincent Marmara , Alan Yeung , Adam Kleczkowski

We have further extended our compartmental model describing the spread of the infection in Italy. The model is based on the assumption that the time evolution of all of the observable quantities (number of people still positive to the…

Physics and Society · Physics 2021-02-09 Corrado Spinella , Antonio Massimiliano Mio

Understanding the dynamics of the COVID-19 pandemic is crucial for improved control and social distancing strategies. To that effect, we have employed the susceptible-exposed-infectious-recovered model, refined by contact tracing and…

Populations and Evolution · Quantitative Biology 2021-01-13 Subhas Khajanchi , Kankan Sarkar , Jayanta Mondal

We propose a detailed discrete-time model of COVID-19 epidemics coming in two flavours, mean-field and probabilistic. The main contribution lies in several extensions of the basic model that capture i) user mobility - distinguishing…

Applications · Statistics 2020-09-14 M. Akian , L. Ganassali , S. Gaubert , L. Massoulié

Addressed in this work is the performance of five popular algorithms, which aim at assessing the dissemination dynamics of the COVID-19 disease on the basis of the time series of new confirmed cases. The tests are based on simulated data,…

Populations and Evolution · Quantitative Biology 2021-05-10 Evangelos Matsinos

Motivated by the rapid spread of COVID-19 all across the globe, we have performed simulations of a system dynamic epidemic spread model in different possible situations. The simulation, not only captures the model dynamic of the spread of…

Populations and Evolution · Quantitative Biology 2020-04-02 Kashif Zia , Umar Farooq

We study the reported data from the COVID-19 pandemic outbreak in January - May 2020 in 119 countries. We observe that the time series of active cases in individual countries (the difference of the total number of confirmed infections and…

Populations and Evolution · Quantitative Biology 2020-05-15 Katarina Bodova , Richard Kollar

COVID-19 pandemic is severely impacting the lives of billions across the globe. Even after taking massive protective measures like nation-wide lockdowns, discontinuation of international flight services, rigorous testing etc., the infection…

Quantitative Methods · Quantitative Biology 2020-08-28 Sayantari Ghosh , Saumik Bhattacharya

The outbreak of Coronavirus Disease 2019 (COVID-19) is an ongoing pandemic affecting over 200 countries and regions. Inference about the transmission dynamics of COVID-19 can provide important insights into the speed of disease spread and…

Methodology · Statistics 2020-07-06 Tianjian Zhou , Yuan Ji

The aim of the paper is to describe a model of the development of the Covid-19 contamination of the population of a country or a region. For this purpose a special branching process with two types of individuals is considered. This model is…

Methodology · Statistics 2020-04-03 Nikolay M. Yanev , Vessela K. Stoimenova , Dimitar V. Atanasov

The time varying effective reproduction number is an important parameter for communication and policy decisions during an epidemic. In this paper, we present new statistical methods for estimating the reproduction number based on the…

Methodology · Statistics 2025-10-02 Hans R. Künsch , Fabio Sigrist

This paper extends the canonical model of epidemiology, the SIRD model, to allow for time-varying parameters for real-time measurement and prediction of the trajectory of the Covid-19 pandemic. Time variation in model parameters is captured…

Econometrics · Economics 2023-02-01 Cem Cakmakli , Yasin Simsek

We propose a stochastic SIR model, specified as a system of stochastic differential equations, to analyse the data of the Italian COVID-19 epidemic, taking also into account the under-detection of infected and recovered individuals in the…

Populations and Evolution · Quantitative Biology 2021-02-22 Sara Pasquali , Antonio Pievatolo , Antonella Bodini , Fabrizio Ruggeri