Related papers: Theta palindromes in theta conjugates
Minimal absent words (MAW) of a genomic sequence are subsequences that are absent themselves but the subwords of which are all present in the sequence. The characteristic distribution of genomic MAWs as a function of their length has been…
Consider a population evolving as a critical continuous-time Galton-Watson (GW) tree. Conditional on the population surviving until a large time $T$, sample $k$ individuals uniformly at random (without replacement) from amongst those alive…
We study the secondary structure of RNA determined by Watson-Crick pairing without pseudo-knots using Milnor invariants of links. We focus on the first non-trivial invariant, which we call the Heisenberg invariant. The Heisenberg invariant,…
Scattered factor (circular) universality was firstly introduced by Barker et al. in 2020. A word $w$ is called $k$-universal for some natural number $k$, if every word of length $k$ of $w$'s alphabet occurs as a scattered factor in $w$; it…
A subsequence of a word $w$ is a word $u$ such that $u = w[i_1] w[i_2] , \dots w[i_{|u|}]$, for some set of indices $1 \leq i_1 < i_2 < \dots < i_k \leq |w|$. A word $w$ is $k$-subsequence universal over an alphabet $\Sigma$ if every word…
A finite word $w$ of length $n$ contains at most $n+1$ distinct palindromic factors. If the bound $n+1$ is attained, the word $w$ is called rich. An infinite word $w$ is called rich if every finite factor of $w$ is rich. Let $w$ be a word…
Starting in the 1970s with the fundamental work of Imre Simon, \emph{scattered factors} (also known as subsequences or scattered subwords) have remained a consistently and heavily studied object. The majority of work on scattered factors…
We establish a number of "concatenation theorems" that assert, roughly speaking, that if a function exhibits "polynomial" (or "Gowers anti-uniform", "uniformly almost periodic", or "nilsequence") behaviour in two different directions…
Motivated by Hilbert's 16th problem we discuss the probabilities of topological features of a system of random homogeneous polynomials. The distribution for the polynomials is the Kostlan distribution. The topological features we consider…
We prove that for every integer $n > 0$ and for every alphabet $\Sigma_k$ of size $k \geq 3$, there exists a necklace of length $n$ whose Burrows-Wheeler Transform (BWT) is completely unclustered, i.e., it consists of exactly $n$ runs with…
Partial words are sequences over a finite alphabet that may contain wildcard symbols, called holes, which match or are compatible with all letters; partial words without holes are said to be full words (or simply words). Given an infinite…
The subword complexity of a word $w$ over a finite alphabet $\mathcal{A}$ is a function that assigns for each positive integer $n$, the number of distinct subwords of length $n$ in $w$. The subword complexity of a word is a good measure of…
A simple Parry number is a real number \beta>1 such that the R\'enyi expansion of 1 is finite, of the form d_\beta(1)=t_1...t_m. We study the palindromic structure of infinite aperiodic words u_\beta that are the fixed point of a…
The goal of this paper is to understand the set $\mathrm{End}(W)$ of endomorphisms of an irreducible spherical reflection group $W$. We do this in two ways: numerically, by deriving an explicit formula for $|\mathrm{End}(W)|$; and…
The complexity function of an infinite word $w$ on a finite alphabet $A$ is the sequence counting, for each non-negative $n$, the number of words of length $n$ on the alphabet $A$ that are factors of the infinite word $w$. For any given…
Vaughan Pratt has introduced objects consisting of pairs $(A,W)$ where $A$ is a set and $W$ a set of subsets of $A,$ such that (i) $W$ contains $\emptyset$ and $A,$ (ii) if $C$ is a subset of $A\times A$ such that for every $a\in A,$ both…
For each integer partition $\lambda \vdash n$ we give a simple combinatorial expression for the sum of the Jack character $\theta^\lambda_\alpha$ over the integer partitions of $n$ with no singleton parts. For $\alpha = 1,2$ this gives…
We prove some general results about the asymptotics of the distribution of the number of cycles of given length of a random permutation whose distribution is invariant under conjugation. These results were first established to be applied in…
We show that the congruence lattice of a semilattice satsifies a form of distributivity relative to principal congruences of the form $ \Theta_{t \odot s, s}$. Particularly, we establish that semilattice congruences obey the ``pairwise…
This paper is concerned with palindromes occurring in characteristic Sturmian words $c_\alpha$ of slope $\alpha$, where $\alpha \in (0,1)$ is an irrational. As $c_\alpha$ is a uniformly recurrent infinite word, any (palindromic) factor of…