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Software vulnerability detection can be formulated as a binary classification problem that determines whether a given code snippet contains security defects. Existing multimodal methods typically fuse Natural Code Sequence (NCS)…

Software Engineering · Computer Science 2026-04-24 Yun Bian , Yi Chen , HaiQuan Wang , ShiHao Li , Zhe Cui

We revisit the problem of missing tag identification in RFID networks by making three contributions. Firstly, we quantitatively compare and gauge the existing propositions spanning over a decade on missing tag identification. We show that…

Networking and Internet Architecture · Computer Science 2025-10-22 Kanghuai Liu , Lin Chen , Jihong Yu , Junyi Huang , Shiyuan Liu

Gene finding is the task of identifying the locations of coding sequences within the vast amount of genetic code contained in the genome. With an ever increasing quantity of raw genome sequences, gene finding is an important avenue towards…

Genomics · Quantitative Biology 2025-05-07 Frederikke I. Marin , Dennis Pultz , Wouter Boomsma

This study focuses on the classification of cancerous and healthy slices from multimodal lung images. The data used in the research comprises Computed Tomography (CT) and Positron Emission Tomography (PET) images. The proposed strategy…

Image and Video Processing · Electrical Eng. & Systems 2025-02-04 Surochita Pal , Sushmita Mitra

We present here Nested_fit, a Bayesian data analysis code developed for investigations of atomic spectra and other physical data. It is based on the nested sampling algorithm with the implementation of an upgraded lawn mower robot method…

Atomic Physics · Physics 2024-01-30 Martino Trassinelli

The interaction between proteins and DNA is a key driving force in a significant number of biological processes such as transcriptional regulation, repair, recombination, splicing, and DNA modification. The identification of DNA-binding…

Quantitative Methods · Quantitative Biology 2017-05-10 Hamid Reza Hassanzadeh , Pushkar Kolhe , Charles L. Isbell , May D. Wang

Identifying interactions between proteins is important to understand underlying biological processes. Extracting a protein-protein interaction (PPI) from the raw text is often very difficult. Previous supervised learning methods have used…

Quantitative Methods · Quantitative Biology 2018-08-10 Mahtab Ahmed , Jumayel Islam , Muhammad Rifayat Samee , Robert E. Mercer

The ability to characterize proteins at sequence-level resolution is vital to biological research. Currently, the leading method for protein sequencing is by liquid chromatography mass spectrometry (LC-MS) whereas proteins are reduced to…

Genomics · Quantitative Biology 2025-07-11 René L. Warren

This paper presents how photonics associated with new arising detection technologies is able to provide fully integrated instrument for coherent beam combination applied to astrophysical interferometry. The feasibility and operation of…

Instrumentation and Methods for Astrophysics · Physics 2010-11-02 Pierre Kern , Etienne Le Coärer , Pierre Benech

Identity tracing is a technology that uses the selection and collection of identity attributes of the object to be tested to discover its true identity, and it is one of the most important foundational issues in the field of social security…

Information Retrieval · Computer Science 2023-11-07 Decheng Liu , Jiahao Yu , Ruimin Hu , Wenbin Feng

Background: Predictive, stable and interpretable gene signatures are generally seen as an important step towards a better personalized medicine. During the last decade various methods have been proposed for that purpose. However, one…

Genomics · Quantitative Biology 2013-05-28 Yupeng Cun , Holger Fröhlich

Protein-protein interaction (PPI) networks, providing a comprehensive landscape of protein interacting patterns, enable us to explore biological processes and cellular components at multiple resolutions. For a biological process, a number…

Molecular Networks · Quantitative Biology 2016-04-13 Xiuli Ma , Guangyu Zhou , Jingjing Wang , Jian Peng , Jiawei Han

Transcription factors (TFs) are macromolecules that bind to \textit{cis}-regulatory specific sub-regions of DNA promoters and initiate transcription. Finding the exact location of these binding sites (aka motifs) is important in a variety…

Computer Vision and Pattern Recognition · Computer Science 2016-11-18 Hamid Reza Hassanzadeh , May D. Wang

The Radio frequency (RF) fingerprinting technique makes highly secure device authentication possible for future networks by exploiting hardware imperfections introduced during manufacturing. Although this technique has received considerable…

Artificial Intelligence · Computer Science 2023-02-23 Chuanting Zhang , Shuping Dang , Junqing Zhang , Haixia Zhang , Mark A. Beach

Consistency and reliability are crucial for conducting AI research. Many famous research fields, such as object detection, have been compared and validated with solid benchmark frameworks. After AlphaFold2, the protein folding task has…

Biomolecules · Quantitative Biology 2023-08-01 Jaemyung Lee , Kyeongtak Han , Jaehoon Kim , Hasun Yu , Youhan Lee

High-throughput spectrometers are capable of producing data sets containing thousands of spectra for a single biological sample. These data sets contain a substantial amount of redundancy from peptides that may get selected multiple times…

Data Structures and Algorithms · Computer Science 2013-01-08 Fahad Saeed , Trairak Pisitkun , Mark A. Knepper , Jason D. Hoffert

This paper presents a novel framework for track fitting which is usable in a wide range of experiments, independent of the specific event topology, detector setup, or magnetic field arrangement. This goal is achieved through a completely…

High Energy Physics - Experiment · Physics 2014-11-20 C. Höppner , S. Neubert , B. Ketzer , S. Paul

Identifying robust and accurate correspondences across images is a fundamental problem in computer vision that enables various downstream tasks. Recent semi-dense matching methods emphasize the effectiveness of fusing relevant cross-view…

Computer Vision and Pattern Recognition · Computer Science 2024-05-24 Hongkai Chen , Zixin Luo , Yurun Tian , Xuyang Bai , Ziyu Wang , Lei Zhou , Mingmin Zhen , Tian Fang , David McKinnon , Yanghai Tsin , Long Quan

Functional protein-protein interactions are crucial in most cellular processes. They enable multi-protein complexes to assemble and to remain stable, and they allow signal transduction in various pathways. Functional interactions between…

Biomolecules · Quantitative Biology 2018-11-14 Anne-Florence Bitbol

Proteins perform their functions usually by interacting with other proteins. Predicting which proteins interact is a fundamental problem. Experimental methods are slow, expensive, and have a high rate of error. Many computational methods…

Biomolecules · Quantitative Biology 2017-05-22 Yiwei Li , Lucian Ilie
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