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The identification of essential proteins can help in understanding the minimum requirements for cell survival and development. Network-based centrality approaches are commonly used to identify essential proteins from protein-protein…

Computational Engineering, Finance, and Science · Computer Science 2023-11-13 Li Pan , Haoyue Wang , Jing Sun , Bin Li , Bo Yang , Wenbin Li

De novo peptide sequencing algorithms have been widely used in proteomics to analyse tandem mass spectra (MS/MS) and assign them to peptides, but quality-control methods to evaluate the confidence of de novo peptide sequencing are lagging…

Neural and Evolutionary Computing · Computer Science 2019-08-22 Samaneh Azari , Bing Xue , Mengjie Zhang , Lifeng Peng

Fusion-based place recognition is an emerging technique jointly utilizing multi-modal perception data, to recognize previously visited places in GPS-denied scenarios for robots and autonomous vehicles. Recent fusion-based place recognition…

Computer Vision and Pattern Recognition · Computer Science 2024-02-28 Jingyi Xu , Junyi Ma , Qi Wu , Zijie Zhou , Yue Wang , Xieyuanli Chen , Ling Pei

Foundation models (FMs) have demonstrated strong performance across diverse pathology tasks. While there are similarities in the pre-training objectives of FMs, there is still limited understanding of their complementarity, redundancy in…

Computer Vision and Pattern Recognition · Computer Science 2025-12-15 Brennan Flannery , Thomas DeSilvio , Jane Nguyen , Satish E. Viswanath

Proteins congregate into complexes to perform fundamental cellular functions. Phenotypic outcomes, in health and disease, are often mechanistically driven by the remodeling of protein complexes by protein coding mutations or cellular…

An extension of the framework of the Finite Integration Technique (FIT) including dynamic and adaptive mesh refinement is presented. After recalling the standard formulation of the FIT, the proposed mesh adaptation procedure is described.…

Computational Physics · Physics 2012-02-15 Sascha M. Schnepp , Erion Gjonaj , Thomas Weiland

This paper presents a technique which exploits the occurrence of certain events as observed by different sensors, to detect and classify objects. This technique explores the extent of dependence between features being observed by the…

Signal Processing · Electrical Eng. & Systems 2021-03-08 Siddharth Roheda , Hamid Krim , Zhi-Quan Luo , Tianfu Wu

Recently, deep neural network (DNN)-based drug-target interaction (DTI) models were highlighted for their high accuracy with affordable computational costs. Yet, the models' insufficient generalization remains a challenging problem in the…

Biomolecules · Quantitative Biology 2021-12-14 Seokhyun Moon , Wonho Zhung , Soojung Yang , Jaechang Lim , Woo Youn Kim

Phosphorylation site prediction based on kinase-substrate interaction plays a vital role in understanding cellular signaling pathways and disease mechanisms. Computational methods for this task can be categorized into kinase-family-focused…

Computational Engineering, Finance, and Science · Computer Science 2025-04-17 Jingjie Zhang , Hanqun Cao , Zijun Gao , Xiaorui Wang , Chunbin Gu

This paper proposes a novel model-free screening procedure for ultrahigh dimensional data analysis. By utilizing slicing technique which has been successfully ap- plied to continuous variables, we construct a new index called the fused…

Methodology · Statistics 2016-12-28 Yan Xiao-Dong , Xie Jin-Han , Ding Xian-Wen , Wang Zhi-Qiang , Tang Nian-Sheng

Font selection is one of the most important steps in a design workflow. Traditional methods rely on ordered lists which require significant domain knowledge and are often difficult to use even for trained professionals. In this paper, we…

Computer Vision and Pattern Recognition · Computer Science 2019-10-03 Tianlang Chen , Zhaowen Wang , Ning Xu , Hailin Jin , Jiebo Luo

Features from multiple scales can greatly benefit the semantic edge detection task if they are well fused. However, the prevalent semantic edge detection methods apply a fixed weight fusion strategy where images with different semantics are…

Computer Vision and Pattern Recognition · Computer Science 2019-02-26 Yuan Hu , Yunpeng Chen , Xiang Li , Jiashi Feng

Most of researches on image forensics have been mainly focused on detection of artifacts introduced by a single processing tool. They lead in the development of many specialized algorithms looking for one or more particular footprints under…

Computer Vision and Pattern Recognition · Computer Science 2017-01-31 Habib Ghaffari Hadigheh , Ghazali bin sulong

With the emergence of GAN, face forgery technologies have been heavily abused. Achieving accurate face forgery detection is imminent. Inspired by remote photoplethysmography (rPPG) that PPG signal corresponds to the periodic change of skin…

Computer Vision and Pattern Recognition · Computer Science 2022-07-05 Jiahao Liang , Weihong Deng

Tagging has been recognized as a successful practice to boost relevance matching for information retrieval (IR), especially when items lack rich textual descriptions. A lot of research has been done for either multi-label text…

Information Retrieval · Computer Science 2020-08-27 Kelong Mao , Xi Xiao , Jieming Zhu , Biao Lu , Ruiming Tang , Xiuqiang He

Protein Fragment Motif Finder (PFMFind) is a system that enables efficient discovery of relationships between short fragments of protein sequences using similarity search. It supports queries based on score matrices and PSSMs obtained…

Quantitative Methods · Quantitative Biology 2013-05-17 Aleksandar Stojmirović , Peter Andreae , Mike Boland , Thomas William Jordan , Vladimir G. Pestov

Tracking any point based on image frames is constrained by frame rates, leading to instability in high-speed scenarios and limited generalization in real-world applications. To overcome these limitations, we propose an image-event fusion…

Computer Vision and Pattern Recognition · Computer Science 2024-09-19 Jiaxiong Liu , Bo Wang , Zhen Tan , Jinpu Zhang , Hui Shen , Dewen Hu

Identifying genes associated with complex human diseases is one of the main challenges of human genetics and computational medicine. To answer this question, millions of genetic variants get screened to identify a few of importance. To…

Genomics · Quantitative Biology 2015-09-01 Aziz M. Mezlini , Fabio Fuligni , Adam Shlien , Anna Goldenberg

In identity management system, frequently used biometric recognition system needs awareness towards issue of protecting biometric template as far as more reliable solution is apprehensive. In sight of this biometric template protection…

Computer Vision and Pattern Recognition · Computer Science 2013-12-31 Shraddha S. Shinde , Prof. Anagha P. Khedkar

Until now, of highest relevance for remote sensing data processing and analysis have been techniques for pixel level image fusion. So, This paper attempts to undertake the study of Feature-Level based image fusion. For this purpose, feature…

Computer Vision and Pattern Recognition · Computer Science 2012-09-18 Firouz Abdullah Al-Wassai , N. V. Kalyankar , Ali A. Al-Zaky