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Network-based interventions against epidemic spread are most powerful when the full network structure is known. However, in practice, resource constraints require decisions to be made based on partial network information. We investigated…

Applications · Statistics 2019-03-19 Yingrui Yang , Ashley McKhann , Sixing Chen , Guy Harling , Jukka-Pekka Onnela

Background: Phage therapy shows promise for treating antibiotic-resistant Klebsiella infections. Identifying phage depolymerases that target Klebsiella capsular polysaccharides is crucial, as these capsules contribute to biofilm formation…

Genomics · Quantitative Biology 2025-01-29 George Wright , Slawomir Michniewski , Eleanor Jameson , Fayyaz ul Amir Afsar Minhas

Parkinson's disease (PD) is a progressive neurodegenerative disorder that lacks reliable early-stage biomarkers for diagnosis, prognosis, and therapeutic monitoring. While cerebrospinal fluid (CSF) biomarkers, such as alpha-synuclein seed…

Methodology · Statistics 2025-07-02 Samhita Pal , Dhrubajyoti Ghosh , Shu Yang

Epidemiology simulations have become a fundamental tool in the fight against the epidemics of various infectious diseases like AIDS and malaria. However, the complicated and stochastic nature of these simulators can mean their output is…

We report the results of searching pulsar-like candidates from the unidentified objects in the $3^{\rm rd}$ Catalog of Hard Fermi-LAT sources (3FHL). Using a machine-learning based classification scheme with a nominal accuracy of…

High Energy Astrophysical Phenomena · Physics 2020-05-01 C. Y. Hui , Jongsu Lee , K. L. Li , Sangin Kim , Kwangmin Oh , Shengda Luo , Alex P. Leung , A. K. H. Kong , J. Takata , K. S. Cheng

Malaria is one of the deadliest infectious diseases globally, causing hundreds of thousands of deaths each year. It disproportionately affects young children, with two-thirds of fatalities occurring in under-fives. Individuals acquire…

Populations and Evolution · Quantitative Biology 2023-06-07 Zhuolin Qu , Denis Patterson , Lauren Childs , Christina Edholm , Joan Ponce , Olivia Prosper , Lihong Zhao

Cancer is one of the most feared diseases in the world it has increased disturbingly and breast cancer occurs in one out of eight women, the prediction of malignancies plays essential roles not only in revealing human genome, but also in…

Computational Engineering, Finance, and Science · Computer Science 2013-03-05 Ayad Ghany Ismaeel , Anar Auda Ablahad

Background In a study performed on multiplex Multiple Sclerosis (MS) Sardinian families to identify disease causing plasma proteins, application of Mendelian Randomization (MR) methods encounters difficulties due to relatedness of…

This study independently reproduces the malware detection methodology presented by Felli cious et al. [7], which employs order-invariant API call frequency analysis using Random Forest classification. We utilized the original public dataset…

Cryptography and Security · Computer Science 2026-01-14 Juhani Merilehto

Constructing lineages of malware is an important cyber-defense task. Performing this task is difficult, however, due to the amount of malware data and obfuscation techniques by the authors. In this work, we formulate the lineage task as a…

Cryptography and Security · Computer Science 2016-03-29 Brian Ruttenberg , Lee Kellogg , Avi Pfeffer

Characterization of host responses associated with severe malaria through an integrative approach is necessary to understand the dynamics of a \textit{Plasmodium cynomolgi} infection. In this study, we conducted temporal immune profiling,…

Tissues and Organs · Quantitative Biology 2017-07-03 Yi H. Yan , Diego M. Moncada , Elizabeth D. Trippe , Juan B. Gutierrez

A new method (`explosive immunization' (EI)) is proposed for immunization and targeted destruction of networks. It combines the explosive percolation (EP) paradigm with the idea of maintaining a fragmented distribution of clusters. The…

Physics and Society · Physics 2016-11-16 Pau Clusella , Peter Grassberger , Francisco J. Perez-Reche , Antonio Politi

Since the arrival of genetic typing methods in the late 1960's, researchers have puzzled at the clinical consequence of observed strain mixtures within clinical isolates of Plasmodium falciparum. We present a new statistical model that…

Applications · Statistics 2015-06-01 John D. O'Brien , Zamin Iqbal , Lucas Amenga-Etego

Malaria is an infectious disease affecting a large population across the world, and interventions need to be efficiently applied to reduce the burden of malaria. We develop a framework to help policy-makers decide how to allocate limited…

Applications · Statistics 2020-03-12 Qian Guan , Brian J. Reich , Eric B. Laber

Malware usually target computers according to their operating system. Thus we have Windows malwares, Linux malwares and so on ... In this paper, we consider a different approach and show on a technical basis how easily malware can recognize…

Cryptography and Security · Computer Science 2015-03-17 Anthony Desnos , Robert Erra , Eric Filiol

The approval success rate of drug candidates is very low with the majority of failure due to safety and efficacy. Increasingly available high dimensional information on targets, drug molecules and indications provides an opportunity for ML…

Machine Learning · Computer Science 2022-07-27 Onuralp Soylemez

In vaccine studies for infectious diseases such as human immunodeficiency virus (HIV), the frequency and type of contacts between study participants and infectious sources are among the most informative risk factors, but are often not…

Applications · Statistics 2012-08-27 Yang Yang , Peter Gilbert , Ira M. Longini, , M. Elizabeth Halloran

The identification and validation of therapeutic antibodies is critical for developing effective treatments for many diseases. We present a computational approach for identifying antibodies targeting GFRAL-specific receptors, receptors…

The number of malware variants is growing tremendously and the study of malware attacks on the Internet is still a demanding research domain. In this research, various logs from different OSI layer are explore to identify the traces leave…

Cryptography and Security · Computer Science 2010-02-09 S. Siti Rahayu , Y. Robiah , S. Shahrin , Mohd M. Zaki , R. Irda , M. A. Faizal

The Influenza type A virus can be considered as one of the most severe viruses that can infect multiple species with often fatal consequences to the hosts. The Haemagglutinin (HA) gene of the virus has the potential to be a target for…

Quantitative Methods · Quantitative Biology 2021-02-16 Charalambos Chrysostomou , Harris Partaourides , Huseyin Seker
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