Related papers: On the Maximum Span of Fixed-Angle Chains
Given a set of points in the plane, we want to establish a connection network between these points that consists of several disjoint layers. Motivated by sensor networks, we want that each layer is spanning and plane, and that no edge is…
We begin by revisiting a paper of Erd\H{o}s and Fishburn, which posed the following question: given $k\in \mathbb{N}$, what is the maximum number of points in a plane that determine at most $k$ distinct distances, and can such optimal…
Two fundamental objects in knot theory are the minimal genus surface and the least area surface bounded by a knot in a 3-dimensional manifold. When the knot is embedded in a general 3-manifold, the problems of finding these surfaces were…
Maximum parsimony distance is a measure used to quantify the dissimilarity of two unrooted phylogenetic trees. It is NP-hard to compute, and very few positive algorithmic results are known due to its complex combinatorial structure. Here we…
Contact-assisted protein folding has made very good progress, but two challenges remain. One is accurate contact prediction for proteins lack of many sequence homologs and the other is that time-consuming folding simulation is often needed…
Bottleneck Steiner networks model energy consumption in wireless ad-hoc networks. The task is to design a network spanning a given set of terminals and at most $k$ Steiner points such that the length of the longest edge is minimised. The…
We study monotone simultaneous embeddings of upward planar digraphs, which are simultaneous embeddings where the drawing of each digraph is upward planar, and the directions of the upwardness of different graphs can differ. We first…
Topological drawings are representations of graphs in the plane, where vertices are represented by points, and edges by simple curves connecting the points. A drawing is simple if two edges intersect at most in a single point, either at a…
Given a finite set $ S $ of points, we consider the following reconfiguration graph. The vertices are the plane spanning paths of $ S $ and there is an edge between two vertices if the two corresponding paths differ by two edges (one…
We propose the first algorithm for non-rigid 2D-to-3D shape matching, where the input is a 2D shape represented as a planar curve and a 3D shape represented as a surface; the output is a continuous curve on the surface. We cast the problem…
Let $\mathcal{S}$ be a finite set of integer points in $\mathbb{R}^d$, which we assume has many symmetries, and let $P\in\mathbb{R}^d$ be a fixed point. We calculate the distances from $P$ to the points in $\mathcal{S}$ and compare the…
Proteins are large biomolecules that regulate all living organisms and consist of one or several chains. The primary structure of a protein chain is a sequence of amino acid residues whose three main atoms (alpha-carbon, nitrogen, and…
We study the problem of embedding graphs in the plane as good geometric spanners. That is, for a graph $G$, the goal is to construct a straight-line drawing $\Gamma$ of $G$ in the plane such that, for any two vertices $u$ and $v$ of $G$,…
We seek to augment a geometric network in the Euclidean plane with shortcuts to minimize its continuous diameter, i.e., the largest network distance between any two points on the augmented network. Unlike in the discrete setting where a…
We prove that, in all dimensions d>=4, every simple open polygonal chain and every tree may be straightened, and every simple closed polygonal chain may be convexified. These reconfigurations can be achieved by algorithms that use…
We prove that any finite collection of polygons of equal area has a common hinged dissection. That is, for any such collection of polygons there exists a chain of polygons hinged at vertices that can be folded in the plane continuously…
An induced matching in a graph is a set of edges whose endpoints induce a $1$-regular subgraph. It is known that any $n$-vertex graph has at most $10^{n/5} \approx 1.5849^n$ maximal induced matchings, and this bound is best possible. We…
By definition, a rigid graph in $\mathbb{R}^d$ (or on a sphere) has a finite number of embeddings up to rigid motions for a given set of edge length constraints. These embeddings are related to the real solutions of an algebraic system.…
An important application of distance geometry to biochemistry studies the embeddings of the vertices of a weighted graph in the three-dimensional Euclidean space such that the edge weights are equal to the Euclidean distances between…
The spine of a trisected 4-manifold is a singular 3-dimensional set from which the trisection itself can be reconstructed. 3-manifolds embedded in the trisected 4--manifold can often be isotoped to lie almost or entirely in the spine of the…