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Let $P$ be a set of $n$ points in the plane. We consider a variation of the classical Erd\H{o}s-Szekeres problem, presenting efficient algorithms with $O(n^3)$ running time and $O(n^2)$ space complexity that compute: (1) A subset $S$ of $P$…

Computational Geometry · Computer Science 2024-12-18 Hernán González-Aguilar , David Orden , Pablo Pérez-Lantero , David Rappaport , Carlos Seara , Javier Tejel , Jorge Urrutia

The multiscale simplicial flat norm (MSFN) of a d-cycle is a family of optimal homology problems indexed by a scale parameter {\lambda} >= 0. Each instance (mSFN) optimizes the total weight of a homologous d-cycle and a bounded (d +…

Computational Geometry · Computer Science 2024-07-01 Kostiantyn Lyman

Let ${\cal P}$ be a set of $n$ points embedded in the plane, and let ${\cal C}$ be the complete Euclidean graph whose point-set is ${\cal P}$. Each edge in ${\cal C}$ between two points $p, q$ is realized as the line segment $[pq]$, and is…

Computational Geometry · Computer Science 2016-03-15 Iyad Kanj , Ljubomir Perković , Duru Türkoǧlu

Strip packing is a classical packing problem, where the goal is to pack a set of rectangular objects into a strip of a given width, while minimizing the total height of the packing. The problem has multiple applications, e.g. in scheduling…

Data Structures and Algorithms · Computer Science 2016-10-26 Anna Adamaszek , Tomasz Kociumaka , Marcin Pilipczuk , Michał Pilipczuk

Solving a longstanding problem on equiangular lines, we determine, for each given fixed angle and in all sufficiently large dimensions, the maximum number of lines pairwise separated by the given angle. Fix $0 < \alpha < 1$. Let…

Combinatorics · Mathematics 2022-03-01 Zilin Jiang , Jonathan Tidor , Yuan Yao , Shengtong Zhang , Yufei Zhao

We introduce a model of proteins in which all of the key atoms in the protein backbone are accounted for, thus extending the Freely Rotating Chain model. We use average bond lengths and average angles from the Protein Databank as input…

Soft Condensed Matter · Physics 2009-09-29 Hamed Seyed-allaei

We are interested in embedding trees T with maximum degree at most four in a rectangular grid, such that the vertices of T correspond to grid points, while edges of T correspond to non-intersecting straight segments of the grid lines. Such…

Combinatorics · Mathematics 2021-09-08 V. T. F. Luca , F. S. Oliveira , J. L. Szwarcfiter

Recent studies classify the topology of proteins by analysing the distribution of their projections using knotoids. The approximation of this distribution depends on the number of projection directions that are sampled. Here we investigate…

Geometric Topology · Mathematics 2021-02-19 Agnese Barbensi , Dimos Goundaroulis

We consider embeddings of planar graphs in $R^2$ where vertices map to points and edges map to polylines. We refer to such an embedding as a polyline drawing, and ask how few bends are required to form such a drawing for an arbitrary planar…

Computational Geometry · Computer Science 2014-06-17 Taylor Gordon

Solving linear programs is often a challenging task in distributed settings. While there are good algorithms for solving packing and covering linear programs in a distributed manner (Kuhn et al.~2006), this is essentially the only class of…

Data Structures and Algorithms · Computer Science 2017-09-12 Michael Dinitz , Yasamin Nazari

This paper introduces the \emph{$d$-distance matching problem}, in which we are given a bipartite graph $G=(S,T;E)$ with $S=\{s_1,\dots,s_n\}$, a weight function on the edges and an integer $d\in\mathbb Z_+$. The goal is to find a maximum…

Combinatorics · Mathematics 2023-01-24 Péter Madarasi

The (axis-parallel) stabbing number of a given set of line segments is the maximum number of segments that can be intersected by any one (axis-parallel) line. This paper deals with finding perfect matchings, spanning trees, or…

Computational Geometry · Computer Science 2008-09-05 Sandor P. Fekete , Marco Luebbecke , Henk Meijer

We consider the problem of finding an optimal piecewise linear path (polygonal line) connecting two given points with the possibility of making n turns at some points (the absolute value of each turn angle does not exceed a prescribed…

Optimization and Control · Mathematics 2026-05-18 Nefedov V. N

We study augmenting a plane Euclidean network with a segment, called a shortcut, to minimize the largest distance between any two points along the edges of the resulting network. Problems of this type have received considerable attention…

Computational Geometry · Computer Science 2018-07-27 Delia Garijo , Alberto Márquez , Natalia Rodríguez , Rodrigo I. Silveira

An instance of the Connected Maximum Cut problem consists of an undirected graph G = (V, E) and the goal is to find a subset of vertices S $\subseteq$ V that maximizes the number of edges in the cut \delta(S) such that the induced graph…

Data Structures and Algorithms · Computer Science 2015-07-03 MohammadTaghi Hajiaghayi , Guy Kortsarz , Robert MacDavid , Manish Purohit , Kanthi Sarpatwar

Protein folding is the intricate process by which a linear sequence of amino acids self-assembles into a unique three-dimensional structure. Protein folding kinetics is the study of pathways and time-dependent mechanisms a protein undergoes…

Machine Learning · Computer Science 2023-09-19 Vijay Arvind. R , Haribharathi Sivakumar , Brindha. R

A linkage $\mathcal{L}$ consists of a graph $G=(V,E)$ and an edge-length function $\ell$. Deciding whether $\mathcal{L}$ can be realized as a planar straight-line embedding in $\mathbb{R}^2$ with edge length $\ell(e)$ for all $e \in E$ is…

Computational Geometry · Computer Science 2026-04-08 Thomas Depian , Carolina Haase , Martin Nöllenburg , André Schulz

We investigate the structure of fixed point sets of self-embeddings of models of arithmetic. In particular, given a countable nonstandard model M of a modest fragment of Peano arithimetic, we provide complete characterizations of (a) the…

Logic · Mathematics 2018-01-24 Saeideh Bahrami , Ali Enayat

We study the problem of rotating a simple polygon to contain the maximum number of elements from a given point set in the plane. We consider variations of this problem where the rotation center is a given point or lies on a line segment, a…

Computational Geometry · Computer Science 2020-07-21 Carlos Alegría-Galicia , David Orden , Leonidas Palios , Carlos Seara , Jorge Urrutia

We establish the expressibility in fixed-point logic with counting (FPC) of a number of natural polynomial-time problems. In particular, we show that the size of a maximum matching in a graph is definable in FPC. This settles an open…

Logic in Computer Science · Computer Science 2013-04-26 Matthew Anderson , Anuj Dawar , Bjarki Holm
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