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相关论文: On the efficiency of exchange in parallel temperin…

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We present an adaptive multi-GPU Exchange Monte Carlo method designed for the simulation of the 3D Random Field Model. The algorithm design is based on a two-level parallelization scheme that allows the method to scale its performance in…

计算物理 · 物理学 2016-08-10 C. A. Navarro , Wei Huang , Youjin Deng

We present a study of the parallel tempering (replica exchange) Monte Carlo method, with special focus on the feedback-optimized parallel tempering algorithm, used for generating an optimal set of simulation temperatures. This method is…

统计力学 · 物理学 2014-10-15 Krzysztof Lewandowski , Piotr Knychala , Michal Banaszak

We discuss the advantages of parallelization by multithreading on graphics processing units (GPUs) for parallel tempering Monte Carlo computer simulations of an exemplified bead-spring model for homopolymers. Since the sampling of a large…

计算物理 · 物理学 2015-05-28 Jonathan Groß , Wolfhard Janke , Michael Bachmann

Parallel tempering, also known as replica exchange sampling, is an important method for simulating complex systems. In this algorithm simulations are conducted in parallel at a series of temperatures, and the key feature of the algorithm is…

概率论 · 数学 2012-06-14 Paul Dupuis , Yufei Liu , Nuria Plattner , J. D. Doll

A new algorithm for Monte Carlo calculation of the double exchange model is studied. The algorithm is commonly applicable to wide classes of strongly correlated electron systems which involve itinerant electrons coupled with…

强关联电子 · 物理学 2009-11-07 Nobuo Furukawa , Yukitoshi Motome , Hisaho Nakata

Parallel tempering, also known as replica exchange Monte Carlo, is studied in the context of two simple free energy landscapes. The first is a double well potential defined by two macrostates separated by a barrier. The second is a `golf…

统计力学 · 物理学 2013-05-29 Jon Machta

We study the dynamics of parallel tempering simulations, also known as the replica exchange technique, which has become the method of choice for simulation of proteins and other complex systems. Recent results for the optimal choice of the…

统计力学 · 物理学 2009-11-13 Walter Nadler , Ulrich H. E. Hansmann

We present results from our study of the Parallel Tempering algorithm. We examine the swapping acceptance rate of a twin subensemble PT system. We use action matching technology in an attempt to maximise the swap acceptance rate. We model…

高能物理 - 格点 · 物理学 2009-10-31 Balint Joo , UKQCD Collaboration

We show that the acceptance probability for swaps in the parallel tempering Monte Carlo method for classical canonical systems is given by a universal function that depends on the average statistical fluctuations of the potential and on the…

化学物理 · 物理学 2009-11-10 Cristian Predescu , Mihaela Predescu , Cristian V. Ciobanu

We introduce an algorithm to systematically improve the efficiency of parallel tempering Monte Carlo simulations by optimizing the simulated temperature set. Our approach is closely related to a recently introduced adaptive algorithm that…

其他凝聚态物理 · 物理学 2007-05-23 Helmut G. Katzgraber , Simon Trebst , David A. Huse , Matthias Troyer

We present a novel Exchange Monte Carlo (EMC) method designed for application in continuous-space Path Integral Monte Carlo (PIMC) simulations at finite temperature. Traditional PIMC methods for bosonic systems suffer from long…

统计力学 · 物理学 2026-05-26 Xun Zhao , Synge Todo

A variant of the parallel tempering method is proposed in terms of a stochastic switching process for the coupled dynamics of replica configuration and temperature permutation. This formulation is shown to facilitate the analysis of the…

化学物理 · 物理学 2017-12-20 Jianfeng Lu , Eric Vanden-Eijnden

We introduce a new update scheme to systematically improve the efficiency of parallel tempering simulations. We show that by adapting the number of sweeps between replica exchanges to the canonical autocorrelation time, the average…

统计力学 · 物理学 2008-09-26 Elmar Bittner , Andreas Nussbaumer , Wolfhard Janke

Simulated and parallel tempering are families of Markov Chain Monte Carlo algorithms where a temperature parameter is varied during the simulation to overcome bottlenecks to convergence due to multimodality. In this work we introduce and…

离散数学 · 计算机科学 2016-07-20 Nayantara Bhatnagar , Dana Randall

Parallel tempering, or replica exchange, is a popular method for simulating complex systems. The idea is to run parallel simulations at different temperatures, and at a given swap rate exchange configurations between the parallel…

概率论 · 数学 2016-04-20 J. D. Doll , Paul Dupuis , Pierre Nyquist

We discuss the possibility of implementing asynchronous replica-exchange (or parallel tempering) molecular dynamics. In our scheme, the exchange attempts are driven by asynchronous messages sent by one of the computing nodes, so that…

计算物理 · 物理学 2009-11-23 Giovanni Bussi

We review the history of the parallel tempering simulation method. From its origins in data analysis, the parallel tempering method has become a standard workhorse of physiochemical simulations. We discuss the theory behind the method and…

计算物理 · 物理学 2017-09-13 David J. Earl , Michael W. Deem

Parallel tempering simulates at many quark masses simultaneously, by changing the mass during the simulation while remaining in equilibrium. The algorithm is faster than pure HMC if more than one mass is needed, and works better the smaller…

高能物理 - 格点 · 物理学 2009-10-30 G. Boyd

We present a novel implementation of the parallel tempering Monte Carlo method in a multicanonical ensemble. Multicanonical weights are derived by a self-consistent iterative process using a Boltzmann inversion of global energy histograms.…

软凝聚态物质 · 物理学 2009-11-07 Roland Faller , Qiliang Yan , Juan J. de Pablo

We propose an efficient Monte Carlo algorithm for simulating a ``hardly-relaxing" system, in which many replicas with different temperatures are simultaneously simulated and a virtual process exchanging configurations of these replica is…

凝聚态物理 · 物理学 2009-10-28 Koji Hukushima , Koji Nemoto
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