相关论文: Zipf's Law in Gene Expression

Zipf's law is just one out of many universal laws proposed to describe statistical regularities in language. Here we review and critically discuss how these laws can be statistically interpreted, fitted, and tested (falsified). The modern…

Scientific cooperation on an international level has been well studied in the literature. However, much less is known about this cooperation on the intercontinental level. In this paper, we address this issue by creating a collection of…

A key aim in biology and psychology is to identify fundamental principles underpinning the behavior of animals, including humans. Analyses of human language and the behavior of a range of non-human animal species have provided evidence for…

Here we sketch a new derivation of Zipf's law for word frequencies based on optimal coding. The structure of the derivation is reminiscent of Mandelbrot's random typing model but it has multiple advantages over random typing: (1) it starts…

A family of information theoretic models of communication was introduced more than a decade ago to explain the origins of Zipf's law for word frequencies. The family is a based on a combination of two information theoretic principles:…

Regulatory interactions between genes show a large amount of cross-species variability, even when the underlying functions are conserved: There are many ways to achieve the same function. Here we investigate the ability of regulatory…

We use the formalism of 'Maximum Principle of Shannon's Entropy' to derive the general power law distribution function, using what seems to be a reasonable physical assumption, namely, the demand of a constant mean "internal order"…

A curious observation was made that the rank statistics of scientific citation numbers follows Zipf-Mandelbrot's law. The same pow-like behavior is exhibited by some simple random citation models. The observed regularity indicates not so…

The power law is useful in describing count phenomena such as network degrees and word frequencies. With a single parameter, it captures the main feature that the frequencies are linear on the log-log scale. Nevertheless, there have been…

Natural languages are full of rules and exceptions. One of the most famous quantitative rules is Zipf's law which states that the frequency of occurrence of a word is approximately inversely proportional to its rank. Though this `law' of…

Human language, the most powerful communication system in history, is closely associated with cognition. Written text is one of the fundamental manifestations of language, and the study of its universal regularities can give clues about how…

Zipf's law is a paradigm describing the importance of different elements in communication systems, especially in linguistics. Despite the complexity of the hierarchical structure of language, music has in some sense an even more complex…

In this paper, we propose an optimization-based mechanism to explain power law distributions, where the function that the optimization process is seeking to optimize is derived mathematically, then the behavior and interpretation of this…

Zipf's law in its basic incarnation is an empirical probability distribution governing the frequency of usage of words in a language. As Terence Tao recently remarked, it still lacks a convincing and satisfactory mathematical explanation.…

We study a resource utilization scenario characterized by intrinsic fitness. To describe the growth and organization of different cities, we consider a model for resource utilization where many restaurants compete, as in a game, to attract…

Recently several authors have proposed stochastic evolutionary models for the growth of complex networks that give rise to power-law distributions. These models are based on the notion of preferential attachment leading to the ``rich get…

In many situations, the gene expression signature is a unique marker of the biological state. We study the modification of the gene expression distribution function when the biological state of a system experiences a change. This change may…

The distribution functions of the codon usage probabilities, computed over all the available GenBank data, for 40 eukaryotic biological species and 5 chloroplasts, do not follow a Zipf law, but are best fitted by the sum of a constant, an…

The frequency of the preferred order for a noun phrase formed by demonstrative, numeral, adjective and noun has received significant attention over the last two decades. We investigate the actual distribution of the 24 possible orders.…

We introduce a simple and generic model that reproduces Zipf's law. By regarding the time evolution of the model as a random walk in the logarithmic scale, we explain theoretically why this model reproduces Zipf's law. The explanation shows…