相关论文: Codon Distributions in DNA
This paper presents a probabilistic approach for DNA sequence analysis. A DNA sequence consists of an arrangement of the four nucleotides A, C, T and G and different representation schemes are presented according to a probability measure…
The generalized parton distributions, introduced nearly a decade ago, have emerged as a universal tool to describe hadrons in terms of quark and gluonic degrees of freedom. They combine the features of form factors, parton densities and…
DNA segments and sequences have been studied thoroughly during the past decades. One of the main problems in computational biology is the identification of exon-intron structures inside genes using mathematical techniques. Previous studies…
An introductory to generalized parton distributions is given which emphasizes their spectral property and its uses as well as the equivalence of various GPD representations. Furthermore, the status of the theory and phenomenology of hard…
The concepts of Generalized Parton Distributions (GPD) are reviewed in an introductory and phenomenological fashion. These distributions provide a rich and unifying picture of the nucleon structure. Their physical meaning is discussed. The…
In this paper, I will explain in as simple and intuitive physical terms as possible what generalized parton distributions are, what new information about the structure of hadrons they convey and therefore what picture of the hadron will…
A spin chain, describing a nucleotides sequence, is identified by the labels of a vector state of an irreducible representation of U_q->0(sl2). A master equation for the distribution function is written, where the intensity of the one-spin…
How to represent the genetic code? Despite the fact that it is extensively known, the DNA mapping into proteins remains as one of the relevant discoveries of genetics. However, modern genomic signal processing usually requires converting…
Recent advances in high-throughput genomics technologies have resulted in the sequencing of large numbers of (near) complete genomes. These genome sequences are being mined for important functional elements, such as genes. They are also…
The relevance of measuring Generalized Parton Distributions (GPDs) for few nucleon systems is illustrated. An approach which permits to calculate the GPDs of hadrons made of composite constituents by proper convolutions is described. The…
Important aspects of the process of information storage and retrieval in DNA and RNA, and its evolution, are the role of the anticodons and associated $t$RNA's, and correlations between anticodons and amino acids; the degeneracy of the…
We summarize recent developments in understanding the concept of generalized parton distributions (GPDs), its relation to nucleon structure, and its application to high-Q2 electroproduction processes. Following a brief review of QCD…
We study a simple model of DNA evolution in a growing population of cells. Each cell contains a nucleotide sequence which randomly mutates at cell division. Cells divide according to a branching process. Following typical parameter values…
We study the evolution behavior of generalized parton distributions at small longitudinal momentum fraction. Particular attention is paid to the ratio of a generalized parton distribution and its forward limit, to the mixing between quarks…
A geometrical method is presented for the calculation of the strand distribution functions for cable-in-conduit superconductors with simple and multiply connected cross-sections. The method is illustrated on different cable designs with…
The quantum statistical approach proposed more than one decade ago was used to determine the parton distributions for the proton by considering a large set of accurate Deep Inelastic Scattering experimental results. We propose to extend…
We present a computational method to evaluate the end-to-end and the contour length distribution functions of short DNA molecules described by a mesoscopic Hamiltonian. The method generates a large statistical ensemble of possible…
In this article, we review recent lattice calculations on the $x$-dependence of parton distributions, with the latter providing information on hadron structure. These calculations are based on matrix elements of boosted hadrons coupled to…
Data on the number of Open Reading Frames (ORFs) coded by genomes from the 3 domains of Life show some notable general features including essential differences between the Prokaryotes and Eukaryotes, with the number of ORFs growing linearly…
The distance distribution of a code is the vector whose $i^\text{th}$ entry is the number of pairs of codewords with distance $i$. We investigate the structure of the distance distribution for cyclic orbit codes, which are subspace codes…