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Phylogenetic networks provide a framework for representing evolutionary histories involving reticulate events such as hybridization or horizontal gene transfer. A central problem is to infer such networks from local structural information.…

离散数学 · 计算机科学 2026-05-12 Patricia A. Ebert , Marc Hellmuth

We propose and show the efficacy of a new method to address generic inverse problems. Inverse modeling is the task whereby one seeks to determine the control parameters of a natural system that produce a given set of observed measurements.…

机器学习 · 计算机科学 2023-08-15 Gregory P. Spell , Simiao Ren , Leslie M. Collins , Jordan M. Malof

Accurate multi-step flight trajectory prediction plays an important role in Air Traffic Control, which can ensure the safety of air transportation. Two main issues limit the flight trajectory prediction performance of existing works. The…

计算机视觉与模式识别 · 计算机科学 2025-08-21 Lan Wu , Xuebin Wang , Ruijuan Chu , Guangyi Liu , Jing Zhang , Linyu Wang

Computer network tends to be subjected to the proliferation of mobile demands and increasingly multifarious, therefore it poses a great challenge to guarantee the quality of network service. By designing the model according to different…

网络与互联网体系结构 · 计算机科学 2021-01-22 Yue Hong Gao , Xiao Hong , Hao Tian Yang , Lu Chen , Xiao Nan Zhang

Inference of gene regulatory networks has been an active area of research for around 20 years, leading to the development of sophisticated inference algorithms based on a variety of assumptions and approaches. With the always increasing…

分子网络 · 定量生物学 2022-11-03 Malvina Marku , Vera Pancaldi

Distributed network optimization has been studied for well over a decade. However, we still do not have a good idea of how to design schemes that can simultaneously provide good performance across the dimensions of utility optimality,…

网络与互联网体系结构 · 计算机科学 2017-07-19 Sinong Wang , Ness Shroff

We consider causal inference in the presence of unobserved confounding. We study the case where a proxy is available for the unobserved confounding in the form of a network connecting the units. For example, the link structure of a social…

机器学习 · 统计学 2019-06-03 Victor Veitch , Yixin Wang , David M. Blei

Complex networks are an important paradigm of modern complex systems sciences which allows quantitatively assessing the structural properties of systems composed of different interacting entities. During the last years, intensive efforts…

We propose an Embedding Network Autoregressive Model for multivariate networked longitudinal data. We assume the network is generated from a latent variable model, and these unobserved variables are included in a structural peer effect…

统计方法学 · 统计学 2025-03-25 Jae Ho Chang , Subhadeep Paul

Network inference algorithms are valuable tools for the study of large-scale neuroimaging datasets. Multivariate transfer entropy is well suited for this task, being a model-free measure that captures nonlinear and lagged dependencies…

神经元与认知 · 定量生物学 2019-07-31 Leonardo Novelli , Patricia Wollstadt , Pedro Mediano , Michael Wibral , Joseph T. Lizier

Bayesian inference methods rely on numerical algorithms for both model selection and parameter inference. In general, these algorithms require a high computational effort to yield reliable estimates. One of the major challenges in…

定量方法 · 定量生物学 2018-08-09 Patricio Maturana , Brendon J. Brewer , Steffen Klaere , Remco Bouckaert

Network inference is the process of learning the properties of complex networks from data. Besides using information about known links in the network, node attributes and other forms of network metadata can help to solve network inference…

数据分析、统计与概率 · 物理学 2021-03-29 Oscar Fajardo-Fontiveros , Marta Sales-Pardo , Roger Guimera

Time series forecasting using historical data has been an interesting and challenging topic, especially when the data is corrupted by missing values. In many industrial problem, it is important to learn the inference function between the…

机器学习 · 计算机科学 2023-06-02 Trang H. Tran , Lam M. Nguyen , Kyongmin Yeo , Nam Nguyen , Dzung Phan , Roman Vaculin , Jayant Kalagnanam

Estimating influential nodes in large scale networks including but not limited to social networks, biological networks, communication networks, emerging smart grids etc. is a topic of fundamental interest. To understand influences of nodes…

社会与信息网络 · 计算机科学 2014-06-13 Sima Das

We consider the problem of estimating the topology of multiple networks from nodal observations, where these networks are assumed to be drawn from the same (unknown) random graph model. We adopt a graphon as our random graph model, which is…

机器学习 · 统计学 2022-12-21 Madeline Navarro , Santiago Segarra

In this paper, we propose an efficient numerical implementation of Network Embedding based on commute times, using sparse approximation of a diffusion process on the network obtained by a modified version of the diffusion wavelet algorithm.…

机器学习 · 计算机科学 2023-08-29 Paula Mercurio , Di Liu

Understanding network health is essential to improve Internet reliability. For instance, detecting disruptions in peer and provider networks facilitates the identification of connectivity problems. Currently this task is time consuming for…

网络与互联网体系结构 · 计算机科学 2017-05-16 Romain Fontugne , Emile Aben , Cristel Pelsser , Randy Bush

We study the dynamics of matrix-valued time series with observed network structures by proposing a matrix network autoregression model with row and column networks of the subjects. We incorporate covariate information and a low rank…

统计方法学 · 统计学 2023-02-07 Xuening Zhu , Feifei Wang , Zeng Li , Yanyuan Ma

We introduce new methods for phylogenetic tree quartet construction by using machine learning to optimize the power of phylogenetic invariants. Phylogenetic invariants are polynomials in the joint probabilities which vanish under a model of…

种群与进化 · 定量生物学 2007-05-23 Nicholas Eriksson , Yuan Yao

Generative artificial intelligence (AI) technology is revolutionizing the computing industry. Not only its applications have broadened to various sectors but also poses new system design and optimization opportunities. The technology is…