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Objective: Systematic reviews of scholarly documents often provide complete and exhaustive summaries of literature relevant to a research question. However, well-done systematic reviews are expensive, time-demanding, and labor-intensive.…

计算与语言 · 计算机科学 2020-12-15 Xiaoxiao Li , Rabah Al-Zaidy , Amy Zhang , Stefan Baral , Le Bao , C. Lee Giles

The knowledge regarding the function of proteins is necessary as it gives a clear picture of biological processes. Nevertheless, there are many protein sequences found and added to the databases but lacks functional annotation. The…

定量方法 · 定量生物学 2018-09-13 Anu Vazhayil , Vinayakumar R , Soman KP

We study probability distributions over free algebras of trees. Probability distributions can be seen as particular (formal power) tree series [Berstel et al 82, Esik et al 03], i.e. mappings from trees to a semiring K . A widely studied…

机器学习 · 计算机科学 2008-07-21 François Denis , Amaury Habrard , Rémi Gilleron , Marc Tommasi , Édouard Gilbert

Random Forests have been one of the most popular bagging methods in the past few decades, especially due to their success at handling tabular datasets. They have been extensively studied and compared to boosting models, like XGBoost, which…

机器学习 · 计算机科学 2024-10-28 Dimitris Bertsimas , Vasiliki Stoumpou

Tree-based protocols are ubiquitous in distributed systems. They are flexible, they perform generally well, and, in static conditions, their analysis is mostly simple. Under churn, however, node joins and failures can have complex global…

分布式、并行与集群计算 · 计算机科学 2010-04-27 Supriya Krishnamurthy , John Ardelius , Erik Aurell , Mads Dam , Rolf Stadler , Fetahi Wuhib

When comparing two distributions, it is often helpful to learn at which quantiles or values there is a statistically significant difference. This provides more information than the binary "reject" or "do not reject" decision of a global…

统计理论 · 数学 2018-08-16 Matt Goldman , David M. Kaplan

We consider the probability that a spanning tree chosen uniformly at random from a graph can be partitioned into a fixed number $k$ of trees of equal size by removing $k-1$ edges. In that case, the spanning tree is called {\em splittable}.…

数据结构与算法 · 计算机科学 2026-02-25 David Gillman , Jacob Platnick , Dana Randall

Dynamic regression trees are an attractive option for automatic regression and classification with complicated response surfaces in on-line application settings. We create a sequential tree model whose state changes in time with the…

统计方法学 · 统计学 2010-11-23 Matthew A. Taddy , Robert B. Gramacy , Nicholas G. Polson

We present a new approach to the global fairness verification of tree-based classifiers. Given a tree-based classifier and a set of sensitive features potentially leading to discrimination, our analysis synthesizes sufficient conditions for…

机器学习 · 计算机科学 2022-09-28 Stefano Calzavara , Lorenzo Cazzaro , Claudio Lucchese , Federico Marcuzzi

Numbers and numerical vectors account for a large portion of data. However, recently the amount of string data generated has increased dramatically. Consequently, classifying string data is a common problem in many fields. The most widely…

机器学习 · 统计学 2016-02-24 Hitoshi Koyano , Morihiro Hayashida , Tatsuya Akutsu

Within bioinformatics, the textual alignment of amino acid sequences has long dominated the determination of similarity between proteins, with all that implies for shared structure, function and evolutionary descent. Despite the relative…

定量方法 · 定量生物学 2016-02-10 Amit K Chattopadhyay , Diar Nasiev , Darren R Flower

Motivated by an open problem of validating protein identities in label-free shotgun proteomics work-flows, we present a testing procedure to validate class/protein labels using available measurements across instances/peptides. More…

统计方法学 · 统计学 2020-06-05 Melissa C. Key , Ben Boukai

Combining machine learning with econometric analysis is becoming increasingly prevalent in both research and practice. A common empirical strategy involves the application of predictive modeling techniques to 'mine' variables of interest…

计量经济学 · 经济学 2020-12-22 Mochen Yang , Edward McFowland , Gordon Burtch , Gediminas Adomavicius

Machine learning in high-stakes domains, such as healthcare, faces two critical challenges: (1) generalizing to diverse data distributions given limited training data while (2) maintaining interpretability. To address these challenges, we…

机器学习 · 计算机科学 2023-07-11 Keyan Nasseri , Chandan Singh , James Duncan , Aaron Kornblith , Bin Yu

We study the effectiveness of non-uniform randomized feature selection in decision tree classification. We experimentally evaluate two feature selection methodologies, based on information extracted from the provided dataset: $(i)$…

机器学习 · 统计学 2014-03-25 Anastasios Kyrillidis , Anastasios Zouzias

In many applications of supervised learning, multiple classification or regression outputs have to be predicted jointly. We consider several extensions of gradient boosting to address such problems. We first propose a straightforward…

机器学习 · 统计学 2019-05-21 Arnaud Joly , Louis Wehenkel , Pierre Geurts

We develop a new Bayesian modelling framework for the class of higher-order, variable-memory Markov chains, and introduce an associated collection of methodological tools for exact inference with discrete time series. We show that a version…

Probabilistic programming languages and other machine learning applications often require samples to be generated from a categorical distribution where the probability of each one of $n$ categories is specified as a parameter. If the…

数据结构与算法 · 计算机科学 2019-06-28 Daniel Tang

Random forests are decision tree ensembles that can be used to solve a variety of machine learning problems. However, as the number of trees and their individual size can be large, their decision making process is often incomprehensible. In…

人工智能 · 计算机科学 2022-11-22 Nico Potyka , Xiang Yin , Francesca Toni

The remarkable success of AlphaFold2 in providing accurate atomic-level prediction of protein structures from their amino acid sequence has transformed approaches to the protein folding problem. However, its core paradigm of mapping one…

应用统计 · 统计学 2025-12-12 Yongkai Chen , Samuel WK Wong , SC Kou