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相关论文: Elastohydrodynamic study of actin filaments using …

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We show that the exponential length distribution that is typical of actin filaments under physiological conditions dramatically narrows in the presence of (i) crosslinker proteins (ii) polyvalent counterions or (iii) depletion mediated…

软凝聚态物质 · 物理学 2007-05-23 David Biron , Elisha Moses , Itamar Borukhov , S. A. Safran

Fluid-structure simulations of slender inextensible filaments in a viscous fluid are often plagued by numerical stiffness. Recent coarse-graining studies have reduced the computational requirements of simulating such systems, though have…

流体动力学 · 物理学 2021-01-04 Benjamin J. Walker , Kenta Ishimoto , Eamonn A. Gaffney

Active semiflexible filaments are crucial in various biophysical processes, yet insights into their single-filament behavior have predominantly relied on theory and simulations, owing to the scarcity of controllable synthetic systems. Here,…

软凝聚态物质 · 物理学 2025-07-14 Bipul Biswas , Prasanna More , Hima Nagamanasa Kandula

The persistence length of semiflexible polymers and one-dimensional fluid membranes is obtained from the renormalization of their bending rigidity. The renormalized bending rigidity is calculated using an exact real-space functional…

统计力学 · 物理学 2012-05-02 Petra Gutjahr , Reinhard Lipowsky , Jan Kierfeld

We use optical tweezers microrheology and fluorescence microscopy to apply nonlinear microscale strains to entangled and crosslinked actin networks, and measure the resulting stress and actin filament deformations. We couple nonlinear…

软凝聚态物质 · 物理学 2016-10-24 Bekele Gurmessa , Shea Ricketts , Rae M. Robertson-Anderson

We consider a classical elastohydrodynamic model of an inextensible filament undergoing planar motion in $\mathbb{R}^3$. The hydrodynamics are described by resistive force theory, and the fiber elasticity is governed by Euler-Bernoulli beam…

偏微分方程分析 · 数学 2023-02-22 Yoichiro Mori , Laurel Ohm

We propose a class of microstructurally informed models for the linear elastic mechanical behavior of cross-linked polymer networks such as the actin cytoskeleton. Salient features of the models include the possibility to represent…

其他定量生物学 · 定量生物学 2008-02-27 Ronald Y. Kwon , Adrian J. Lew , Christopher R. Jacobs

We consider an explicit model of a semiflexible filament moving in two dimensions on a gliding assay of motor proteins, which attach to and detach from filament segments stochastically, with a detachment rate that depends on the local load…

软凝聚态物质 · 物理学 2019-05-23 Nisha Gupta , Abhishek Chaudhuri , Debasish Chaudhuri

Active bodies in viscous fluids interact hydrodynamically through self-generated flows. Here we study spontaneous aggregation induced by hydrodynamic flow in a suspension of stiff, apolar, active filaments. Lateral hydrodynamic attractions…

软凝聚态物质 · 物理学 2015-08-20 Ankita Pandey , P. B. Sunil Kumar , R. Adhikari

We use nonequilibrium molecular dynamics simulations to verify recent tube-model predictions that associative polymer networks exhibit broad stretch fluctuations during elongational flow. Simulations further show that these fluctuating…

软凝聚态物质 · 物理学 2025-04-11 Songyue Liu , Thomas C. O'Connor

We study theoretically the hydrodynamics of a fluid drop containing oriented filaments endowed with active contractile or extensile stresses and placed on a solid surface. The active stresses alter qualitatively the wetting properties of…

软凝聚态物质 · 物理学 2015-06-03 Jean-Francois Joanny , Sriram Ramaswamy

We develop a novel biased Monte-Carlo simulation technique to measure the force-extension curves and the distribution function of the extension of fluctuating filaments stretched by external force. The method is applicable for arbitrary…

软凝聚态物质 · 物理学 2007-05-23 David A. Kessler , Yitzhak Rabin

Cells moving on a two dimensional substrate generate motion by polymerizing actin filament networks inside a flat membrane protrusion. New filaments are generated by branching off existing ones, giving rise to branched network structures.…

生物物理 · 物理学 2015-06-29 Mohammadhosein Razbin , Martin Falcke , Panayotis Benetatos , Annette Zippelius

Inspired by experiments on the actin driven propulsion of micrometer sized beads we develop and study a minimal mechanical model of a two-dimensional network of stiff elastic filaments grown from the surface of a cylinder. Starting out from…

软凝聚态物质 · 物理学 2010-11-16 Denis Caillerie , Karin John , Chaouqi Misbah , Philippe Peyla , Annie Raoult

We describe the effect of hydrodynamic interactions in the sedimentation of a pair of inextensible semiflexible filaments under a uniform constant force at low Reynolds numbers. We have analyzed the different regimes and the morphology of…

软凝聚态物质 · 物理学 2009-11-13 Isaac Llopis , Ignacio Pagonabarraga , Marco Cosentino Lagomarsino , Christopher P. Lowe

Using a simple model, we study the fluctuating dynamics of inextensible, semiflexible polar filaments interacting with active and directed force generating centres such as molecular motors. Taking into account the fact that the activity…

软凝聚态物质 · 物理学 2009-11-07 Tanniemola B. Liverpool

We simulate the nonlocal Stokesian hydrodynamics of an elastic filament which is active due a permanent distribution of stresslets along its contour. A bending instability of an initially straight filament spontaneously breaks flow symmetry…

We present a generic theory for the dynamics of a stiff filament under tension, in an active medium with orientational correlations, such as a microtubule in contractile actin. In sharp contrast to the case of a passive medium, we find the…

软凝聚态物质 · 物理学 2009-01-28 Norio Kikuchi , Allen Ehrlicher , Daniel Koch , Josef A. Käs , Sriram Ramaswamy , Madan Rao

We investigate the gravitational settling of a long, model elastic filament in homogeneous isotropic turbulence. We show that the flow produces a strongly fluctuating settling velocity, whose mean is moderately enhanced over the still-fluid…

流体动力学 · 物理学 2021-01-05 Rahul K. Singh , Jason R. Picardo , Samriddhi Sankar Ray

Semiflexible polymers such as filamentous actin play a vital role in the mechanical behavior of cells, yet the basic properties of cross-linked F-actin networks remain poorly understood. To address this issue, we have performed numerical…

软凝聚态物质 · 物理学 2009-11-10 D. A. Head , A. J. Levine , F. C. MacKintosh