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Using the analytical Fick-Jacobs approximation formalism and extensive Brownian dynamics simulations we study particle transport through two-dimensional periodic channels with triangularly shaped walls. Directed motion is caused by the…

统计力学 · 物理学 2013-10-28 S. Martens , G. Schmid , A. V. Straube , L. Schimansky-Geier , P. Hänggi

Ion channels are proteins with holes down their middle that control the flow of ions and electric current across otherwise impermeable biological membranes. The flow of sodium, potassium, calcium (divalent), and chloride ions have been…

生物大分子 · 定量生物学 2012-06-07 Bob Eisenberg

Many microfluidic devices use macroscopic pressure differentials to overcome viscous friction and generate flows in microchannels. In this work, we investigate how the chemical and geometric properties of the channel walls can drive a net…

Ion channels form pores across the lipid bilayer, selectively allowing inorganic ions to cross the membrane down their electrochemical gradient. While the study of ion desolvation free-energies have attracted much attention, the role of…

化学物理 · 物理学 2012-07-31 Diego Prada-Gracia , Francesco Rao

The effective interaction between two probe particles in a one-dimensional driven system is studied. The analysis is carried out using an asymmetric simple exclusion process with nearest-neighbor interactions. It is found that the driven…

统计力学 · 物理学 2009-11-10 E. Levine , D. Mukamel , G. M. Schutz

The conduction and selectivity of calcium/sodium ion channels are described in terms of ionic Coulomb blockade, a phenomenon based on charge discreteness and an electrostatic model of an ion channel. This novel approach provides a unified…

生物物理 · 物理学 2014-05-07 I. Kh. Kaufman , P. V. E. McClintock , R. S. Eisenberg

Evaluating the channel capacity is one of many key problems in information theory. In this work we derive rather-mild sufficient conditions under which the capacity is finite and achievable. These conditions are derived for generic,…

信息论 · 计算机科学 2015-12-18 Jihad Fahs , Ibrahim Abou-Faycal

Inspired by numerous lab on a chip, biomedical and bioengineering applications such as cell sorting, focusing, trapping, and filtering of particles, manipulation of micron sized particle trajectories has been of significant interest in the…

流体动力学 · 物理学 2026-03-18 Partha Kumar Das

We show that transport in the presence of entropic barriers exhibits peculiar characteristics which makes it distinctly different from that occurring through energy barriers. The constrained dynamics yields a scaling regime for the particle…

统计力学 · 物理学 2009-11-11 D. Reguera , G. Schmid , P. S. Burada , J. M. Rubí , P. Hänggi

Diffusive transport of particles or, more generally, small objects is a ubiquitous feature of physical and chemical reaction systems. In configurations containing confining walls or constrictions transport is controlled both by the…

统计力学 · 物理学 2009-01-22 P. Sekhar Burada , Peter Hanggi , Fabio Marchesoni , Gerhard Schmid , Peter Talkner

We study the transport properties of classical particles in the ballistic regime trapped in a two-dimensional channel with dephased ripple boundaries. By taking into account small ripple amplitudes an analytical approximate expression for…

介观与纳米尺度物理 · 物理学 2026-01-16 Gabriel Arroyo-Correa , Ivan Herrera-Gonzalez , Alberto Mendoza Suarez , Eduardo S. Tututi

The effect of curvature and how it induces and enhances the transport of colloidal particles driven through narrow channels represent an unexplored research avenue. Here we combine experiments and simulations to investigate the dynamics of…

Long, shallow microchannels embedded in thick soft materials are widely used in microfluidic devices for lab-on-a-chip applications. However, the bulging effect caused by fluid--structure interactions between the internal viscous flow and…

流体动力学 · 物理学 2019-12-03 Xiaojia Wang , Ivan C. Christov

We investigate the transport dynamics of elongated microparticles in microchannel flows. While smooth-walled channels preserve the dependence of particle trajectories on initial orientation and lateral position, we show that introducing…

流体动力学 · 物理学 2026-04-13 Fatemeh S. Ahmadi , Hossein Hamzehpour , Reza Shaebani

The collision dynamics of hard spheres and cylindrical pores is solved exactly, which is the minimal model for a regularly porous membrane. Nonequilibrium event-driven molecular dynamics simulations are used to show that the permeability…

软凝聚态物质 · 物理学 2021-04-23 Yue Yu , Kai Zhang

Potassium channels play critical roles in many physiological processes, providing a selective permeation route for K+ ions in and out of a cell, by employing a carefully designed selectivity filter, evolutionarily conserved from viruses to…

生物物理 · 物理学 2021-04-16 Andrei Mironenko , Ulrich Zachariae , Bert L. de Groot , Wojciech Kopec

Emergent bath-mediated attraction and condensation arise when multiple particles are simultaneously driven through an equilibrated bath under geometric constraints. While such scenarios are observed in a variety of non-equilibrium…

统计力学 · 物理学 2021-08-25 Asaf Miron , David Mukamel , Harald A. Posch

A thin film at a liquid interface responds to uniaxial confinement by wrinkling and then by folding; its shape and energy have been computed exactly before self contact. Here, we address the mechanics of large folds, i.e. folds that absorb…

软凝聚态物质 · 物理学 2014-10-22 Vincent Démery , Benny Davidovitch , Christian D. Santangelo

We propose the use of topographic modulation of surfaces to select and localize particles in nematic colloids. By considering convex and concave deformations of one of the confining surfaces we show that the colloid-flat surface repulsion…

软凝聚态物质 · 物理学 2014-10-15 Z. Eskandari , N. M. Silvestre , M. M. Telo da Gama , M. R. Ejtehadi

Particles in pressure-driven channel flow are often inhomogeneously distributed. Two modes of low-Reynolds number instability, absent in Poiseuille flow of clean fluid, are created by inhomogeneous particle loading, and their mechanism is…

流体动力学 · 物理学 2024-11-27 Anup Kumar , Rama Govindarajan