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Networks with nodes embedded in a metric space have gained increasing interest in recent years. The effects of spatial embedding on the networks' structural characteristics, however, are rarely taken into account when studying their…

物理与社会 · 物理学 2016-07-06 Marc Wiedermann , Jonathan F. Donges , Jürgen Kurths , Reik V. Donner

Disordered hyperuniform systems are exotic states of matter that completely suppress large-scale density fluctuations like crystals, and yet possess no Bragg peaks similar to liquids or glasses. Such systems have been discovered in a…

软凝聚态物质 · 物理学 2021-11-10 Duyu Chen , Yu Zheng , Yang Jiao

Defects are a ubiquitous feature of ordered media. They have certain universal features, independent of the underlying physical system, reflecting their topological origins. While the topological properties of defects are robust, they…

软凝聚态物质 · 物理学 2021-02-24 Chiqun Zhang , Amit Acharya , Alan C. Newell , Shankar C. Venkataramani

Whereas knowledge of a crystalline material's unit cell is fundamental to understanding the material's properties and behavior, there are not obvious analogues to unit cells for disordered materials despite the frequent existence of…

计算几何 · 计算机科学 2020-05-27 Benjamin Schweinhart , David Rodney , Jeremy Mason

Much of the theory on chemical-reaction networks (CRNs) has been developed in the ideal-solution limit, where interactions between the solutes are negligible. However, there is a large variety of phenomena in biological cells and…

生物物理 · 物理学 2022-12-09 Ander Movilla Miangolarra , Michele Castellana

Designed as extremely deep architectures, deep residual networks which provide a rich visual representation and offer robust convergence behaviors have recently achieved exceptional performance in numerous computer vision problems. Being…

计算机视觉与模式识别 · 计算机科学 2017-04-13 T. Hoang Ngan Le , Chi Nhan Duong , Ligong Han , Khoa Luu , Marios Savvides , Dipan Pal

Spin models of neural networks and genetic networks are considered elegant as they are accessible to statistical mechanics tools for spin glasses and magnetic systems. However, the conventional choice of variables in spin systems may cause…

无序系统与神经网络 · 物理学 2012-12-10 Matthias Rybarsch , Stefan Bornholdt

Understanding the structural origins of the properties of amorphous materials remains one of the most important challenges in structural science. In this study we demonstrate that local 'structural simplicity', embodied by the degree to…

In this work, we present an atomistic first-principles framework for modeling the low-temperature electronic and transport properties of disordered two-dimensional (2D) materials with randomly distributed point defects (impurities). The…

介观与纳米尺度物理 · 物理学 2020-02-11 Kristen Kaasbjerg

Exactly solvable neural network models with asymmetric weights are rare, and exact solutions are available only in some mean-field approaches. In this article we find exact analytical solutions of an asymmetric spin-glass-like model of…

神经元与认知 · 定量生物学 2017-02-16 Diego Fasoli , Anna Cattani , Stefano Panzeri

Establishing reliable and interpretable structure-property relationships in glasses is a longstanding challenge in condensed matter physics. While modern data-driven machine learning techniques have proven highly effective in establishing…

无序系统与神经网络 · 物理学 2026-02-06 Chenyan Wang , Mouyang Cheng , Ji Chen

Most models of complex systems have been homogeneous, i.e., all elements have the same properties (spatial, temporal, structural, functional). However, most natural systems are heterogeneous: few elements are more relevant, larger,…

适应与自组织系统 · 物理学 2025-12-22 Amahury Jafet López-Díaz , Fernanda Sánchez-Puig , Carlos Gershenson

We address a fundamental question: under which conditions do the dynamics and thermodynamics of open chemical reaction networks (CRNs), grounded on the notion of idealized chemostats that exchange selected species, emerge from underlying…

统计力学 · 物理学 2026-04-17 Benedikt Remlein , Massimiliano Esposito , Francesco Avanzini

Disordered systems like liquids, gels, glasses, or granular materials are not only ubiquitous in daily life and in industrial applications but they are also crucial for the mechanical stability of cells or the transport of chemical and…

无序系统与神经网络 · 物理学 2019-04-30 Zhen Zhang , Walter Kob

A novel approach is presented for the solution of instantaneous chemical equilibrium problems. The chemical equilibrium can be considered, due to its intrinsically local character, as a mapping of the three-dimensional parameter space…

天体物理学 · 物理学 2009-11-11 A. Asensio Ramos , H. Socas-Navarro

Biochemical systems that express certain chemical species of interest at the same level at any positive equilibrium are called "absolute concentration robust" (ACR). These species behave in a stable, predictable way, in the sense that their…

亚细胞过程 · 定量生物学 2019-10-15 Daniele Cappelletti , Ankit Gupta , Mustafa Khammash

Using a collective coordinate numerical optimization procedure, we construct ground-state configurations of interacting particle systems in various space dimensions so that the scattering of radiation exactly matches a prescribed pattern…

统计力学 · 物理学 2009-11-13 Robert D. Batten , Frank H. Stillinger , Salvatore Torquato

Chemical reaction networks (CRNs) are foundational models for describing complex biochemical processes. We study noncompetitive CRNs, a class of networks whose static states are rate-independent, and that can implement ReLU neural networks.…

分子网络 · 定量生物学 2025-12-22 Louis Faul , Xavier Richard , Mary Betrisey , Christian Mazza

Random graph models have been instrumental in characterizing complex networks, but chemical reaction networks (CRNs) are better represented as hypergraphs. Traditional models of random CRNs often reduce CRNs to bipartite graphs,…

统计力学 · 物理学 2025-07-15 Shesha Gopal Marehalli Srinivas , Massimiliano Esposito , Nahuel Freitas

Most AI-for-Materials research to date has focused on ideal crystals, whereas real-world materials inevitably contain defects that play a critical role in modern functional technologies. The defects break geometric symmetry and increase…

材料科学 · 物理学 2025-06-03 Ziduo Yang , Xiaoqing Liu , Xiuying Zhang , Pengru Huang , Kostya S. Novoselov , Lei Shen