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Structure and dynamics of complex networks usually deal with degree distributions, clustering, shortest path lengths and other graph properties. Although these concepts have been analysed for graphs on abstract spaces, many networks happen…

统计力学 · 物理学 2009-11-13 M. O. Hase , J. F. F. Mendes

In biological systems, the growth of cells, tissues, and organs is influenced by mechanical cues. Locally, cell growth leads to a mechanically heterogeneous environment as cells pull and push their neighbors in a cell network. Despite this…

Mechanistic models can provide an intuitive and interpretable explanation of network growth by specifying a set of generative rules. These rules can be defined by domain knowledge about real-world mechanisms governing network growth or may…

社会与信息网络 · 计算机科学 2025-12-04 Maxwell H Wang , Till Hoffmann , Jukka-Pekka Onnela

Network structures are extremely important to the study of political science. Much of the data in its subfields are naturally represented as networks. This includes trade, diplomatic and conflict relationships. The social structure of…

统计方法学 · 统计学 2011-05-05 Drew Conway

In real networks complex topological features are often associated with a diversity of interactions as measured by the weights of the links. Moreover, spatial constraints may as well play an important role, resulting in a complex interplay…

物理与社会 · 物理学 2014-11-18 Luca Dall'Asta , Alain Barrat , Marc Barthelemy , Alessandro Vespignani

Random Boolean networks have been used widely to explore aspects of gene regulatory networks. A modified form of the model through which to systematically explore the effects of increasing the number of gene states has previously been…

分子网络 · 定量生物学 2023-02-06 Larry Bull

The population structure often impacts evolutionary dynamics. In constant-selection evolutionary dynamics between two types, amplifiers of selection are networks that promote the fitter mutant to take over the entire population, and…

物理与社会 · 物理学 2024-09-04 Jnanajyoti Bhaumik , Naoki Masuda

Many real-world complex systems, such as epidemic spreading networks and ecosystems, can be modeled as networked dynamical systems that produce multivariate time series. Learning the intrinsic dynamics from observational data is pivotal for…

机器学习 · 计算机科学 2024-12-30 Yanna Ding , Zijie Huang , Malik Magdon-Ismail , Jianxi Gao

The recent discovery of universal principles underlying many complex networks occurring across a wide range of length scales in the biological world has spurred physicists in trying to understand such features using techniques from…

生物物理 · 物理学 2015-05-13 Sitabhra Sinha

We analyze a model of interacting agents (e.g. prebiotic chemical species) which are represended by nodes of a network, whereas their interactions are mapped onto directed links between these nodes. On a fast time scale, each agent follows…

种群与进化 · 定量生物学 2009-11-13 Adrian M. Seufert , Frank Schweitzer

In this work we present a model for evolving networks, where the driven force is related to the social affinity between individuals in a population. In the model, a set of individuals initially arranged on a regular ordered network and thus…

适应与自组织系统 · 物理学 2009-11-13 B. Ruyu , M. N. Kuperman

The connections in many networks are not merely binary entities, either present or not, but have associated weights that record their strengths relative to one another. Recent studies of networks have, by and large, steered clear of such…

统计力学 · 物理学 2009-11-10 M. E. J. Newman

Topological metrics of graphs provide a natural way to describe the prominent features of various types of networks. Graph metrics describe the structure and interplay of graph edges and have found applications in many scientific fields. In…

数据结构与算法 · 计算机科学 2018-06-21 Loukianos Spyrou , Javier Escudero

Modeling networks can serve as a means of summarizing high-dimensional complex systems. Adapting an approach devised for dense, weighted networks, we propose a new method for generating and estimating unweighted networks. This approach can…

物理与社会 · 物理学 2024-04-12 Benjamin Leinwand , Vince Lyzinski

A random graph evolution rule is considered. The graph evolution is based on interactions of three vertices. The weight of a clique is the number of its interactions. The asymptotic behaviour of the weights is described. It is known that…

概率论 · 数学 2014-12-23 István Fazekas , Csaba Noszály , Attila Perecsényi

This paper studies reduced-order modeling of dynamic networks with strongly connected topology. Given a graph clustering of an original complex network, we construct a quotient graph with less number of vertices, where the edge weights are…

最优化与控制 · 数学 2020-03-10 Xiaodong Cheng , Lanlin Yu , Dingchao Ren , Jacquelien M. A. Scherpen

Complex networks often exhibit co-evolutionary dynamics, meaning that the network topology and the state of nodes or links are coupled, affecting each other in overlapping time scales. We focus on the co-evolutionary dynamics of online…

社会与信息网络 · 计算机科学 2015-08-24 Demetris Antoniades , Constantine Dovrolis

Many systems in nature, society and technology can be described as networks, where the vertices are the system's elements and edges between vertices indicate the interactions between the corresponding elements. Edges may be weighted if the…

物理与社会 · 物理学 2011-04-18 Filippo Radicchi , José J. Ramasco , Santo Fortunato

Evolving out-of-equilibrium networks have been under intense scrutiny recently. In many real-world settings the number of links added per new node is not constant but depends on the time at which the node is introduced in the system. This…

物理与社会 · 物理学 2009-10-08 David M. D. Smith , Jukka-Pekka Onnela , Neil F. Johnson

Trends change rapidly in today's world, prompting this key question: What is the mechanism behind the emergence of new trends? By representing real-world dynamic systems as complex networks, the emergence of new trends can be symbolized by…

社会与信息网络 · 计算机科学 2018-10-16 Michael Fire , Carlos Guestrin