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Understanding how stochastic and non-linear deterministic processes interact is a major challenge in population dynamics theory. After a short review, we introduce a stochastic individual-centered particle model to describe the evolution in…

概率论 · 数学 2009-06-29 Regis Ferriere , Viet Chi Tran

We discuss several models of the dynamics of interacting populations. The models are constructed by nonlinear differential equations and have two sets of parameters: growth rates and coefficients of interaction between populations. We…

适应与自组织系统 · 物理学 2013-07-29 Nikolay K. Vitanov , Zlatinka I. Dimitrova

We introduce a simple model of population dynamics which considers birth and death rates for every individual that depend on the number of particles in its neighborhood. The model shows an inhomogeneous quasistationary pattern with many…

凝聚态物理 · 物理学 2009-11-10 Emilio Hernandez-Garcia , Cristobal Lopez

We introduce a model of interacting Random Walk, whose hopping amplitude depends on the number of walkers/particles on the link. The mesoscopic counterpart of such a microscopic dynamics is a diffusing system whose diffusivity depends on…

统计力学 · 物理学 2008-10-01 E. Agliari , M. Casartelli , A. Vezzani

We present some numerical results obtained from a simple individual based model that describes clustering of organisms caused by competition. Our aim is to show how, even when a deterministic description developed for continuum models…

统计力学 · 物理学 2009-11-13 E. Brigatti , V. Schwammle , Minos A. Neto

Individual-based models of chemical or biological dynamics usually consider individual entities diffusing in space and performing a birth-death type dynamics. In this work we study the properties of a model in this class where the birth…

统计力学 · 物理学 2009-11-11 Emilio Hernandez-Garcia , Cristobal Lopez

At the macroscopic scale, many important models of collective motion fall into the class of kinematic flows for which both velocity and diffusion terms depend only on particle density. When total particle numbers are fixed and finite,…

适应与自组织系统 · 物理学 2022-04-12 Jeremy Worsfold , Tim Rogers , Paul Milewski

We introduce a stochastic agent-based model for the flocking dynamics of self-propelled particles that exhibit velocity-alignment interactions with neighbours within their field of view. The stochasticity in the dynamics of the model arises…

统计力学 · 物理学 2019-07-24 Trilochan Bagarti , Shakti N. Menon

We study the role of fluctuations in particle systems modeled by Dean-Kawasaki-type equations, which describe the evolution of particle densities in systems with Brownian motion. By comparing microscopic simulations, stochastic partial…

统计力学 · 物理学 2026-04-16 Nathan O. Silvano , Emilio Hernández-García , Cristóbal López

There is mounting empirical evidence that many communities of living organisms display key features which closely resemble those of physical systems at criticality. We here introduce a minimal model framework for the dynamics of a community…

生物物理 · 物理学 2020-02-17 Fabio Peruzzo , Mauro Mobilia , Sandro Azaele

We study the spatial patterns formed by a system of interacting particles where the mobility of any individual is determined by the population crowding at two different spatial scales. In this way we model the behavior of some biological…

Several theoretical frameworks have been proposed to explain observed biodiversity patterns, ranging from the classical niche-based theories, mainly employing a continuous formalism, to neutral theories, based on statistical mechanics of…

定量方法 · 定量生物学 2019-11-01 Xue Feng , Sara Bonetti , Amilcare Porporato

In this paper we study the dynamics of stochastic microorganism flocculation models. Given the strong influence of environmental and seasonal fluctuations that are present in these models, we propose a stochastic model that includes…

概率论 · 数学 2025-11-18 Alexandru Hening , Nguyen T. Hieu , Dang H. Nguyen , Nhu Nguyen

A natural phenomenon occurring in a living system is an outcome of the dynamics of the specific biological network underlying the phenomenon. The collective dynamics have both deterministic and stochastic components. The stochastic nature…

统计力学 · 物理学 2023-09-01 Indrani Bose

We review recent results obtained from simple individual-based models of biological competition in which birth and death rates of an organism depend on the presence of other competing organisms close to it. In addition the individuals…

种群与进化 · 定量生物学 2015-03-03 Emilio Hernandez-Garcia , Els Heinsalu , Cristobal Lopez

Random walks and related spatial stochastic models have been used in a range of application areas including animal and plant ecology, infectious disease epidemiology, developmental biology, wound healing, and oncology. Classical random walk…

种群与进化 · 定量生物学 2025-08-22 Michael J. Plank , Matthew J. Simpson , Ruth E. Baker

Deterministic continuum models formulated in terms of non-local partial differential equations for the evolutionary dynamics of populations structured by phenotypic traits have been used recently to address open questions concerning the…

Mathematical models of motility are often based on random-walk descriptions of discrete individuals that can move according to certain rules. It is usually the case that large masses concentrated in small regions of space have a great…

物理与社会 · 物理学 2022-11-23 Carles Falcó

Understanding under what conditions interacting populations, whether they be plants, animals, or viral particles, coexist is a question of theoretical and practical importance in population biology. Both biotic interactions and…

种群与进化 · 定量生物学 2011-04-26 Sebastian J. Schreiber , Michel Benaïm , Kolawolé A. S. Atchadé

The behavior of interacting populations typically displays irregular temporal and spatial patterns that are difficult to reconcile with an underlying deterministic dynamics. A classical example is the heterogeneous distribution of plankton…

种群与进化 · 定量生物学 2009-11-13 M. H. Vainstein , J. M. Rubi , J. M. G. Vilar
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