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We consider an age-size structured cell population model based on the cell cycle length. The model is described by a first order partial differential equation with initial-boundary conditions. Using the theory of semigroups of positive…

偏微分方程分析 · 数学 2022-06-15 Katarzyna Pichór , Ryszard Rudnicki

We introduce into the Penna Model for biological ageing one of the possible male mechanisms used to maximize the ability of their sperm to compete with sperm from other males. Such a selfish mechanism increases the male reproduction success…

凝聚态物理 · 物理学 2009-11-07 P. M. C de Oliveira , S. Moss de Oliveira

Cellular senescence is thought to play a major role in age-related diseases, which cause nearly 67% of all human deaths worldwide. Recent research in mice showed that exercising mice had higher levels of telomerase, an enzyme that helps…

种群与进化 · 定量生物学 2013-11-13 Avikar Periwal

We employ the framework of multitype Galton-Watson processes to model a population of dividing cells. The cellular type is represented by its biological age, defined as the count of harmful proteins hosted by the cell. The stochastic…

概率论 · 数学 2024-06-03 Serik Sagitov , Lotta Eriksson , Marija Cvijovic

The cell cycle duration is a variable cellular phenotype that underlies long-term population growth and age structures. By analyzing the stationary solutions of a branching process with heritable cell division times, we demonstrate…

种群与进化 · 定量生物学 2021-01-04 Takashi Nozoe , Edo Kussell

We show aging of Glauber-type dynamics on the random energy model, in the sense that we obtain the scaling limits of the clock process and of the age process. The latter encodes the Gibbs weight of the configuration occupied by the…

概率论 · 数学 2013-03-21 Pierre Mathieu , Jean-Christophe Mourrat

The spread of a particular trait in a cell population often is modelled by an appropriate system of ordinary differential equations describing how the sizes of subpopulations of the cells with the same genome change in time. On the other…

动力系统 · 数学 2016-05-26 J. Banasiak , A. Falkiewicz

We introduce a broad class of spatial models to describe how spatially heterogeneous populations live, die, and reproduce. Individuals are represented by points of a point measure, whose birth and death rates can depend both on spatial…

We build upon our previous analytical results for the Penna model of senescence to include positive mutations. We investigate whether a small but non-zero positive mutation rate gives qualitatively different results to the traditional Penna…

种群与进化 · 定量生物学 2007-05-23 J. B. Coe , Y. Mao , M. E. Cates

We removed from the Penna model for biological ageing any random killing Verhulst factor. Deaths are due only to genetic diseases and the population size is fixed, instead of fluctuating around some constant value. We show that these…

统计力学 · 物理学 2007-05-23 S. Moss de Oliveira , P. M. C de Oliveira , J. S. Sa Martins

We present a mathematical simplification for the evolutionary dynamics of a heritable trait within a two-sex population. This trait is assumed to control the timing of sex-specific life-history events, such as the age of sexual maturity and…

种群与进化 · 定量生物学 2019-07-04 M. H. Chan , K. Hawkes , P. S. Kim

Using an artificial system of self-replicating strings, we show a correlation between the age of a genotype and its abundance that reflects a punctuated rather than gradual picture of evolution, as suggested long ago by Willis. In support…

adap-org · 物理学 2008-02-03 C. Adami , C. T. Brown , M. Haggerty

We combine the Penna Model for biological aging, which is based on the mutation-accumulation theory, with a sort of antagonistic pleiotropy. We show that depending on how the pleiotropy is introduced, it is possible to reproduce both the…

统计力学 · 物理学 2009-11-07 A. O. Sousa , S. Moss de Oliveira

We introduce an age-structured asexual population model containing all the relevant features of evolutionary ageing theories. Beneficial as well as deleterious mutations, heredity and arbitrary fecundity are present and managed by natural…

统计力学 · 物理学 2009-10-31 R. N. Onody , N. G. F. de Medeiros

We study a class of evolution models, where the breeding process involves an arbitrary exchangeable process, allowing for mutations to appear. The population size $n$ is fixed, hence after breeding, selection is applied. Individuals are…

概率论 · 数学 2022-05-03 Daniela Bertacchi , Juri Lember , Fabio Zucca

We build upon the recent steady-state Penna model solution, Phys.Rev.Lett. 89, 288103 (2002), to study the population dynamics within the Penna model. We show, that any perturbation to the population can be broken into a collection of modes…

种群与进化 · 定量生物学 2007-05-23 J. B. Coe , Y. Mao

The paper discusses a connection between asymmetric reproduction -- that is reproduction in a parent-child relationship where the parent does not mutate during reproduction --, the fact that all non-viral lifeforms bear genes of their…

种群与进化 · 定量生物学 2015-08-11 Norbert Michael Mayer

Cellular transformations which involve a significant phenotypical change of the cell's state use bistable biochemical switches as underlying decision systems. In this work, we aim at linking cellular decisions taking place on a time scale…

细胞行为 · 定量生物学 2010-05-11 Steffen Waldherr , Jingbo Wu , Frank Allgöwer

Biological time can be measured in two ways: in generations and in physical (chronological) time. When generations overlap, these two notions diverge, which impedes our ability to relate mathematical models to real populations. In this…

种群与进化 · 定量生物学 2026-04-08 Kaan Öcal , Michael P. H. Stumpf

What is aging? Mechanistic answers to this question remain elusive despite decades of research. Here, we propose a mathematical model of cellular aging based on a model gene interaction network. Our network model is made of only non-aging…

分子网络 · 定量生物学 2023-09-12 Hong Qin