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相关论文: Neutral Evolution of Mutational Robustness

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Observation of phenotypic diversity in a population of genetically identical cells is often linked to the stochastic nature of chemical reactions involved in gene regulatory networks. We investigate the distribution of population averaged…

分子网络 · 定量生物学 2015-06-18 Bhaswati Bhattacharyya , Ziya Kalay

Acceptance of an innovation can occur through mutliple exposures to individuals who have already accepted it. Presented here is a model to trace the evolution of an innovation in a social network with a preference $\lambda$, amidst…

物理与社会 · 物理学 2014-08-22 Varsha S. Kulkarni

It is well-known that population structure is a catalyst for the evolution of cooperation since individuals can reciprocate with their neighbors through local interactions defined by network structures. Previous research typically relies on…

物理与社会 · 物理学 2021-12-16 Anzhi Sheng , Aming Li , Long Wang

A biologically motivated individual-based framework for evolution in network-structured populations is developed that can accommodate eco-evolutionary dynamics. This framework is used to construct a network birth and death model. The…

种群与进化 · 定量生物学 2021-03-19 Karan Pattni , Christopher E. Overton , Kieran J. Sharkey

We consider the hypothesis that Evolution promotes population-wide genome patterns that, under randomization, ensures the External Validity of adaptations across population members. An adaptation is Externally Valid (EV) if its effect holds…

种群与进化 · 定量生物学 2021-08-17 Andre F. Ribeiro

Heterozygote disadvantage is potentially a potent driver of population genetic divergence. Also referred to as underdominance, this phenomena describes a situation where a genetic heterozygote has a lower overall fitness than either…

种群与进化 · 定量生物学 2015-09-29 Áki J. Láruson , Floyd A. Reed

The population structure often impacts evolutionary dynamics. In constant-selection evolutionary dynamics between two types, amplifiers of selection are networks that promote the fitter mutant to take over the entire population, and…

物理与社会 · 物理学 2024-09-04 Jnanajyoti Bhaumik , Naoki Masuda

The co-evolution of network topology and dynamics is studied in an evolutionary Boolean network model that is a simple model of gene regulatory network. We find that a critical state emerges spontaneously resulting from interplay between…

统计力学 · 物理学 2007-05-23 Min Liu , Kevin E. Bassler

The neutral theory of genetic and linguistic evolution holds that the relative frequencies of variants evolve by random drift. Neutral evolution remains a plausible null model of language change. In this paper we provide evidence against…

物理与社会 · 物理学 2020-05-18 James Burridge , Tamsin Blaxter

In evolutionary dynamics, a key measure of a mutant trait's success is the probability that it takes over the population given some initial mutant-appearance distribution. This "fixation probability" is difficult to compute in general, as…

种群与进化 · 定量生物学 2022-02-18 Alex McAvoy , Benjamin Allen

Recent microbial experiments suggest that enhanced genetic drift at the frontier of a two-dimensional range expansion can cause genetic sectoring patterns with fractal domain boundaries. Here, we propose and analyze a simple model of…

种群与进化 · 定量生物学 2008-12-12 Oskar Hallatschek , David R. Nelson

In this review some simple models of asexual populations evolving on smooth landscapes are studied. The basic model is based on a cellular automaton, which is analyzed here in the spatial mean-field limit. Firstly, the evolution on a fixed…

统计力学 · 物理学 2016-11-23 Franco Bagnoli , Michele Bezzi

We study the genealogical distance of two randomly chosen individuals in a population that evolves according to a two type Moran model with mutation and selection. We prove that this distance is stochastically smaller than the corresponding…

概率论 · 数学 2018-04-24 Max Grieshammer

Evolutionary analyses of large populations commonly incorporate stochasticity through temporal variation in selection while treating genetic transmission as fixed. Much less attention has been given to stochasticity in transmission itself.…

种群与进化 · 定量生物学 2026-02-24 Elisa Heinrich-Mora , Marcus Feldman

In this work we present a model for evolving networks, where the driven force is related to the social affinity between individuals in a population. In the model, a set of individuals initially arranged on a regular ordered network and thus…

适应与自组织系统 · 物理学 2009-11-13 B. Ruyu , M. N. Kuperman

We study a simple reaction-diffusion population model [proposed by A. Windus and H. J. Jensen, J. Phys. A: Math. Theor. 40, 2287 (2007)] on scale-free networks. In the case of fully random diffusion, the network topology cannot affect the…

物理与社会 · 物理学 2009-11-13 An-Cai Wu , Xin-Jian Xu , J. F. F. Mendes , Ying-Hai Wang

We study a simple model of DNA evolution in a growing population of cells. Each cell contains a nucleotide sequence which randomly mutates at cell division. Cells divide according to a branching process. Following typical parameter values…

概率论 · 数学 2020-06-05 David Cheek , Tibor Antal

We study a family of selection-mutation models of a sexual population structured by a phenotypical trait. The main feature of these models is the asymmetric trait heredity or fecundity between the parents : we assume that each individual…

偏微分方程分析 · 数学 2022-04-11 Benoît Perthame , Martin Strugarek , Cécile Taing

Genetic drift is stochastic fluctuations of alleles frequencies in a population due to sampling effects. We consider a model of drift in an equilibrium population, with high mutation rates: few functional mutations per generation. Such…

种群与进化 · 定量生物学 2017-01-12 Alexey A. Shadrin , Dmitri V. Parkhomchuk

Individuals of different types, may it be genetic, cultural, or else, with different levels of fitness often compete for reproduction and survival. A fitter type generally has higher chances of disseminating their copies to other…

物理与社会 · 物理学 2009-04-24 Naoki Masuda