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Understanding of vascular organization is a long-standing problem in quantitative biology and biophysics and is essential for the growth of large cultured tissues. Approaches are needed that (1) make predictions of optimal arteriovenous…

组织与器官 · 定量生物学 2023-08-25 James P. Hague

Pathological brain appearances may be so heterogeneous as to be intelligible only as anomalies, defined by their deviation from normality rather than any specific pathological characteristic. Amongst the hardest tasks in medical imaging,…

图像与视频处理 · 电气工程与系统科学 2021-02-24 Walter Hugo Lopez Pinaya , Petru-Daniel Tudosiu , Robert Gray , Geraint Rees , Parashkev Nachev , Sebastien Ourselin , M. Jorge Cardoso

Accurate segmentation of cerebral vasculature and a quantitative assessment of cerebrovascular morphology is critical to various diagnostic and therapeutic purposes and is pertinent to studying brain health and disease. However, this is…

定量方法 · 定量生物学 2020-02-27 Aditi Deshpande , Nima Jamilpour , Bin Jiang , Chelsea Kidwell , Max Wintermark , Kaveh Laksari

Generating computational anatomical models of cerebrovascular networks is vital for improving clinical practice and understanding brain oxygen transport. This is achieved by extracting graph-based representations based on pre-mapping of…

定量方法 · 定量生物学 2019-12-23 Rafat Damseh , Patrick Delafontaine-Martel , Philippe Pouliot , Farida Cheriet , Frederic Lesage

The vascular structure of blood vessels is important in diagnosing retinal conditions such as glaucoma and diabetic retinopathy. Accurate segmentation of these vessels can help in detecting retinal objects such as the optic disc and optic…

图像与视频处理 · 电气工程与系统科学 2020-12-18 Abdullah Sarhan , Jon Rokne , Reda Alhajj , Andrew Crichton

This paper presents Deformable Neural Vessel Representations (DeNVeR), an unsupervised approach for vessel segmentation in X-ray angiography videos without annotated ground truth. DeNVeR utilizes optical flow and layer separation…

计算机视觉与模式识别 · 计算机科学 2025-03-26 Chun-Hung Wu , Shih-Hong Chen , Chih-Yao Hu , Hsin-Yu Wu , Kai-Hsin Chen , Yu-You Chen , Chih-Hai Su , Chih-Kuo Lee , Yu-Lun Liu

The vascular network of leaves, comprising xylem and phloem, is a highly optimized system for the delivery of water, nutrients, and sugars. The design rules for these naturally occurring networks have been studied since the time of Leonardo…

生物物理 · 物理学 2024-11-01 Lars Erik J. Skjegstad , Julius B. Kirkegaard

This investigation reports on the results of convolutional neural networks developed for the recently introduced PathologicAL Myopia (PALM) dataset, which consists of 1200 fundus images. We propose a new Optic Nerve Head (ONH)-based…

图像与视频处理 · 电气工程与系统科学 2020-06-05 Ruben Hemelings , Bart Elen , Matthew B. Blaschko , Julie Jacob , Ingeborg Stalmans , Patrick De Boever

Tasks such as autonomous navigation, 3D reconstruction, and object recognition near the water surfaces are crucial in marine robotics applications. However, challenges arise due to dynamic disturbances, e.g., light reflections and…

计算机视觉与模式识别 · 计算机科学 2025-04-16 Jiayi Wu , Xiaomin Lin , Shahriar Negahdaripour , Cornelia Fermüller , Yiannis Aloimonos

The study of the retinal vasculature is a fundamental stage in the screening and diagnosis of many diseases. A complete retinal vascular analysis requires to segment and classify the blood vessels of the retina into arteries and veins…

图像与视频处理 · 电气工程与系统科学 2022-09-21 José Morano , Álvaro S. Hervella , Jorge Novo , José Rouco

Recent advancements in AI have significantly transformed medical imaging, particularly in angiography, by enhancing diagnostic precision and patient care. However existing works are limited in analyzing the aorta and iliac arteries, above…

计算机视觉与模式识别 · 计算机科学 2024-04-29 Vazgen Zohranyan , Vagner Navasardyan , Hayk Navasardyan , Jan Borggrefe , Shant Navasardyan

Retinal vessel segmentation plays a vital role in analyzing fundus images for the diagnosis of systemic and ocular diseases. Building on this, classifying segmented vessels into arteries and veins (A/V) further enables the extraction of…

图像与视频处理 · 电气工程与系统科学 2025-08-07 Shuang Zeng , Chee Hong Lee , Kaiwen Li , Boxu Xie , Ourui Fu , Hangzhou He , Lei Zhu , Yanye Lu , Fangxiao Cheng

We present the first deep learning model for segmenting galactic spiral arms and bars. In a blinded assessment by expert astronomers, our predicted spiral arm masks are preferred over both current automated methods (99% of evaluations) and…

星系天体物理 · 物理学 2023-12-06 Mike Walmsley , Ashley Spindler

Precisely estimating lumen boundaries in intravascular ultrasound (IVUS) is needed for sizing interventional stents to treat deep vein thrombosis (DVT). Unfortunately, current segmentation networks like the UNet lack the precision needed…

Neuroscientific data analysis has classically involved methods for statistical signal and image processing, drawing on linear algebra and stochastic process theory. However, digitized neuroanatomical data sets containing labelled neurons,…

计算几何 · 计算机科学 2018-05-15 Suyi Wang , Xu Li , Partha Mitra , Yusu Wang

Report-supervised (RSuper) learning seeks to alleviate the need for dense tumor voxel labels with constraints derived from radiology reports (e.g., volumes, counts, sizes, locations). In MRI studies of brain tumors, however, we often…

图像与视频处理 · 电气工程与系统科学 2026-02-25 Yubin Ge , Yongsong Huang , Xiaofeng Liu

Deep learning models usually require sufficient training data to achieve high accuracy, but obtaining labeled data can be time-consuming and labor-intensive. Here we introduce a template-based training method to train a 3D U-Net model from…

图像与视频处理 · 电气工程与系统科学 2023-08-07 Fang-Cheng Yeh

Deep unsupervised representation learning has recently led to new approaches in the field of Unsupervised Anomaly Detection (UAD) in brain MRI. The main principle behind these works is to learn a model of normal anatomy by learning to…

图像与视频处理 · 电气工程与系统科学 2020-04-09 Christoph Baur , Stefan Denner , Benedikt Wiestler , Shadi Albarqouni , Nassir Navab

Diffusion-weighted Magnetic Resonance Imaging (dMRI) is increasingly used to study the fetal brain in utero. An important computation enabled by dMRI is streamline tractography, which has unique applications such as tract-specific analysis…

计算机视觉与模式识别 · 计算机科学 2024-03-06 Camilo Calixto , Camilo Jaimes , Matheus D. Soldatelli , Simon K. Warfield , Ali Gholipour , Davood Karimi

Statistical analysis of magnetic resonance imaging (MRI) can help radiologists to detect pathologies that are otherwise likely to be missed. Deep learning (DL) has shown promise in modeling complex spatial data for brain anomaly detection.…

计算机视觉与模式识别 · 计算机科学 2020-11-26 Victor Saase , Holger Wenz , Thomas Ganslandt , Christoph Groden , Máté E. Maros