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Peak picking is a fundamental preprocessing step in Mass Spectrometry Imaging (MSI), where each sample is represented by hundreds to thousands of ion images. Existing approaches require careful dataset-specific hyperparameter tuning, and…

计算机视觉与模式识别 · 计算机科学 2026-04-22 Philipp Weigand , Niels Nawrot , Nikolas Ebert , Carsten Hopf , Oliver Wasenmüller

Several machine learning techniques for accurate detection of skin cancer from medical images have been reported. Many of these techniques are based on pre-trained convolutional neural networks (CNNs), which enable training the models based…

计算机视觉与模式识别 · 计算机科学 2021-05-18 Aqsa Saeed Qureshi , Teemu Roos

Atomistic simulations are a powerful tool for studying the dynamics of molecules, proteins, and materials on wide time and length scales. Their reliability and predictiveness, however, depend directly on the accuracy of the underlying…

化学物理 · 物理学 2024-11-28 Silvan Käser , Debasish Koner , Markus Meuwly

Simulating water from first principles remains a significant computational challenge due to the slow dynamics of the underlying system. Although machine-learned interatomic potentials (MLPs) can accelerate these simulations, they often fail…

化学物理 · 物理学 2026-01-30 Tobias Hilpert , Georg Kresse

Convolutional neural networks typically encode an input image into a series of intermediate features with decreasing resolutions. While this structure is suited to classification tasks, it does not perform well for tasks requiring…

计算机视觉与模式识别 · 计算机科学 2020-06-18 Xianzhi Du , Tsung-Yi Lin , Pengchong Jin , Golnaz Ghiasi , Mingxing Tan , Yin Cui , Quoc V. Le , Xiaodan Song

Designing a neural network architecture for molecular representation is crucial for AI-driven drug discovery and molecule design. In this work, we propose a new framework for molecular representation learning. Our contribution is threefold:…

机器学习 · 计算机科学 2022-10-18 Jiye Kim , Seungbeom Lee , Dongwoo Kim , Sungsoo Ahn , Jaesik Park

Machine learning of atomic-scale properties is revolutionizing molecular modelling, making it possible to evaluate inter-atomic potentials with first-principles accuracy, at a fraction of the costs. The accuracy, speed and reliability of…

The recent success of graph neural networks has significantly boosted molecular property prediction, advancing activities such as drug discovery. The existing deep neural network methods usually require large training dataset for each…

机器学习 · 计算机科学 2021-02-17 Zhichun Guo , Chuxu Zhang , Wenhao Yu , John Herr , Olaf Wiest , Meng Jiang , Nitesh V. Chawla

The advent of machine learning in materials science opens the way for exciting and ambitious simulations of large systems and long time scales with the accuracy of ab-initio calculations. Recently, several pre-trained universal machine…

材料科学 · 物理学 2024-06-28 Luis Casillas-Trujillo , Abhijith S. Parackal , Rickard Armiento , Björn Alling

Classical intermolecular potentials typically require an extensive parametrization procedure for any new compound considered. To do away with prior parametrization, we propose a combination of physics-based potentials with machine learning…

The implicit solvent approach offers a computationally efficient framework to model solvation effects in molecular simulations. However, its accuracy often falls short compared to explicit solvent models, limiting its use in precise…

Calculating intermolecular charge transfer integrals in organic semiconductors requires substantial computer resource for each individual calculation. We might alternatively construct a machine learning model for transfer integrals, which…

无序系统与神经网络 · 物理学 2025-11-11 Keerati Keeratikarn , Christoph Ortner , Jarvist Moore Frost

Modeling molecular potential energy surface is of pivotal importance in science. Graph Neural Networks have shown great success in this field. However, their message passing schemes need special designs to capture geometric information and…

机器学习 · 计算机科学 2023-04-24 Xiyuan Wang , Muhan Zhang

Hyperspectral imagery is rich in spatial and spectral information. Using 3D-CNN can simultaneously acquire features of spatial and spectral dimensions to facilitate classification of features, but hyperspectral image information spectral…

图像与视频处理 · 电气工程与系统科学 2022-02-15 Guandong Li , Chunju Zhang

With many frameworks based on message passing neural networks proposed to predict molecular and bulk properties, machine learning methods have tremendously shifted the paradigms of computational sciences underpinning physics, material…

机器学习 · 计算机科学 2021-09-03 Zun Wang , Chong Wang , Sibo Zhao , Yong Xu , Shaogang Hao , Chang Yu Hsieh , Bing-Lin Gu , Wenhui Duan

Photonic computing is a computing paradigm which have great potential to overcome the energy bottlenecks of electronic von Neumann architecture. Throughput and power consumption are fundamental limitations of…

新兴技术 · 计算机科学 2026-04-06 Saurabh Ranjan , Sonika Thakral , Amit Sehgal

Machine-learning force fields can deliver accurate molecular dynamics (MD) at high computational cost. For SO(3)-equivariant models such as MACE, there is little systematic evidence on whether reduced-precision arithmetic and GPU-optimized…

机器学习 · 计算机科学 2025-10-29 Alexandre Benoit

We develop and compare four interatomic potentials for iron: a simple machine-learned embedded atom method (EAM) potential, a potential with machine-learned two- and three-body-dependent terms, a potential with machine-learned EAM and…

Modelling the complex physics of the Interstellar Medium (ISM) in the context of large-scale numerical simulations is a challenging task. A number of methods have been proposed to embed a description of the ISM into different codes. We…

天体物理仪器与方法 · 物理学 2011-03-03 T. Grassi , E. Merlin , L. Piovan , U. Buonomo , C. Chiosi

Recent advancements in equivariant deep models have shown promise in accurately predicting atomic potentials and force fields in molecular dynamics simulations. Using spherical harmonics (SH) and tensor products (TP), these equivariant…

机器学习 · 计算机科学 2024-11-08 Zhao Xu , Haiyang Yu , Montgomery Bohde , Shuiwang Ji