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Navigating the vast scientific literature often starts with browsing a paper's abstract. However, when a reader seeks additional information, not present in the abstract, they face a costly cognitive chasm during their dive into the full…

人机交互 · 计算机科学 2024-04-17 Raymond Fok , Joseph Chee Chang , Tal August , Amy X. Zhang , Daniel S. Weld

Few-shot medical image segmentation (FSMIS) has achieved notable progress, yet most existing methods mainly rely on semantic correspondences from scarce annotations while under-utilizing a key property of medical imagery: anatomical targets…

计算机视觉与模式识别 · 计算机科学 2026-03-31 Zhihao Mao , Bangpu Chen

Pretraining language models directly on web-scale corpora is the de facto paradigm. We study an alternative where the model is initially exposed to abstract structured data to ease the subsequent acquisition of rich semantic knowledge, much…

计算与语言 · 计算机科学 2026-05-29 Liangze Jiang , Zachary Shinnick , Anton van den Hengel , Hemanth Saratchandran , Damien Teney

Medication recommendations have become an important task in the healthcare domain, especially in measuring the accuracy and safety of medical dialogue systems (MDS). Different from the recommendation task based on electronic health records…

计算与语言 · 计算机科学 2025-05-20 Jialun Zhong , Yanzeng Li , Sen Hu , Yang Zhang , Teng Xu , Lei Zou

We advance the state of the art in biomolecular interaction extraction with three contributions: (i) We show that deep, Abstract Meaning Representations (AMR) significantly improve the accuracy of a biomolecular interaction extraction…

计算与语言 · 计算机科学 2015-12-08 Sahil Garg , Aram Galstyan , Ulf Hermjakob , Daniel Marcu

A vast amount of medical knowledge is available for public use through online health forums, and question-answering platforms on social media. The majority of the population in the United States doesn't have the right amount of health…

计算与语言 · 计算机科学 2025-01-28 Haritha Gangavarapu , Giridhar Kaushik Ramachandran , Kevin Lybarger , Meliha Yetisgen , Özlem Uzuner

The injection of domain-specific knowledge is crucial for adapting language models (LMs) to specialized fields such as biomedicine. While most current approaches rely on unstructured text corpora, this study explores two complementary…

计算与语言 · 计算机科学 2026-04-21 Jaafer Klila , Sondes Bannour Souihi , Rahma Boujelben , Nasredine Semmar , Lamia Hadrich Belguith

The question-answering system for Life science research, which is characterized by the rapid pace of discovery, evolving insights, and complex interactions among knowledge entities, presents unique challenges in maintaining a comprehensive…

计算与语言 · 计算机科学 2024-08-15 Chengrui Wang , Qingqing Long , Meng Xiao , Xunxin Cai , Chengjun Wu , Zhen Meng , Xuezhi Wang , Yuanchun Zhou

This work presents a Biomedical Literature Question Answering (Q&A) system based on a Retrieval-Augmented Generation (RAG) architecture, designed to improve access to accurate, evidence-based medical information. Addressing the shortcomings…

计算与语言 · 计算机科学 2025-09-09 Mansi Garg , Lee-Chi Wang , Bhavesh Ghanchi , Sanjana Dumpala , Shreyash Kakde , Yen Chih Chen

We examine the novel task of domain-independent scientific concept extraction from abstracts of scholarly articles and present two contributions. First, we suggest a set of generic scientific concepts that have been identified in a…

信息检索 · 计算机科学 2020-11-24 Arthur Brack , Jennifer D'Souza , Anett Hoppe , Sören Auer , Ralph Ewerth

Recent advancements in retrieval-augmented generation (RAG) have significantly enhanced the ability of large language models (LLMs) to perform complex question-answering (QA) tasks. In this paper, we introduce MedBioRAG, a…

计算与语言 · 计算机科学 2025-12-15 Seonok Kim

Retrieval-Augmented Generation (RAG) has emerged as a promising approach to address key limitations of Large Language Models (LLMs), such as hallucination, outdated knowledge, and lacking reference. However, current RAG frameworks often…

信息检索 · 计算机科学 2025-09-17 Zihan Wang , Zihan Liang , Zhou Shao , Yufei Ma , Huangyu Dai , Ben Chen , Lingtao Mao , Chenyi Lei , Yuqing Ding , Han Li

Syntactically controlled paraphrase generation has become an emerging research direction in recent years. Most existing approaches require annotated paraphrase pairs for training and are thus costly to extend to new domains. Unsupervised…

计算与语言 · 计算机科学 2022-11-03 Kuan-Hao Huang , Varun Iyer , Anoop Kumar , Sriram Venkatapathy , Kai-Wei Chang , Aram Galstyan

Pretraining large neural language models, such as BERT, has led to impressive gains on many natural language processing (NLP) tasks. However, most pretraining efforts focus on general domain corpora, such as newswire and Web. A prevailing…

计算与语言 · 计算机科学 2021-09-20 Yu Gu , Robert Tinn , Hao Cheng , Michael Lucas , Naoto Usuyama , Xiaodong Liu , Tristan Naumann , Jianfeng Gao , Hoifung Poon

Large Language Models (LLMs) are increasingly adopted for applications in healthcare, reaching the performance of domain experts on tasks such as question answering and document summarisation. Despite their success on these tasks, it is…

计算与语言 · 计算机科学 2025-05-20 Aishik Nagar , Viktor Schlegel , Thanh-Tung Nguyen , Hao Li , Yuping Wu , Kuluhan Binici , Stefan Winkler

Agentic Retrieval-Augmented Generation (Agentic RAG) has become a widely adopted paradigm for multi-hop question answering and complex knowledge reasoning, where retrieval and reasoning are interleaved at inference time. As reasoning…

信息检索 · 计算机科学 2026-04-02 Shuguang Jiao , Chengkai Huang , Shuhan Qi , Xuan Wang , Yifan Li , Lina Yao

The automatic generation of radiology reports has emerged as a promising solution to reduce a time-consuming task and accurately capture critical disease-relevant findings in X-ray images. Previous approaches for radiology report generation…

计算机视觉与模式识别 · 计算机科学 2025-04-17 Sang-Jun Park , Keun-Soo Heo , Dong-Hee Shin , Young-Han Son , Ji-Hye Oh , Tae-Eui Kam

Though exponentially growing health-related literature has been made available to a broad audience online, the language of scientific articles can be difficult for the general public to understand. Therefore, adapting this expert-level…

计算与语言 · 计算机科学 2022-10-25 Kush Attal , Brian Ondov , Dina Demner-Fushman

User-generated texts available on the web and social platforms are often long and semantically challenging, making them difficult to annotate. Obtaining human annotation becomes increasingly difficult as problem domains become more…

计算与语言 · 计算机科学 2023-09-19 Joseph Gatto , Sarah M. Preum

The work in this paper evaluates zero-shot and few-shot large language models (LLMs) for safety-critical clinical action extraction using the CLIP discharge-note dataset, with particular emphasis on transitions of care and post-discharge…

人工智能 · 计算机科学 2026-05-08 Shivali Dalmia , Ananya Mantravadi , Prasanna Desikan