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The Bayesian Context Trees (BCT) framework is a recently introduced, general collection of statistical and algorithmic tools for modelling, analysis and inference with discrete-valued time series. The foundation of this development is built…

信息论 · 计算机科学 2023-09-06 Ioannis Kontoyiannis

Machine learning in high-stakes domains, such as healthcare, faces two critical challenges: (1) generalizing to diverse data distributions given limited training data while (2) maintaining interpretability. To address these challenges, we…

机器学习 · 计算机科学 2023-07-11 Keyan Nasseri , Chandan Singh , James Duncan , Aaron Kornblith , Bin Yu

Longitudinal clinical reasoning over electronic health records requires tracking evolving physiological measurements, laboratory results, and interventions across extended patient trajectories. Existing LLM-based clinical reasoning systems…

机器学习 · 计算机科学 2026-05-27 Zhan Qu , Michael Färber

The overwhelming presence of categorical/sequential data in diverse domains emphasizes the importance of sequence mining. The challenging nature of sequences proves the need for continuing research to find a more accurate and faster…

机器学习 · 计算机科学 2022-04-26 Hadi Jahanshahi , Mustafa Gokce Baydogan

Phenotyping consists in applying algorithms to identify individuals associated with a specific, potentially complex, trait or condition, typically out of a collection of Electronic Health Records (EHRs). Because a lot of the clinical…

As AI-generated summaries proliferate, how can we help people understand the veracity of those summaries? In this short paper, we design a simple interaction primitive, traceable text, to support critical examination of generated summaries…

人机交互 · 计算机科学 2024-09-23 Hita Kambhamettu , Jamie Flores , Andrew Head

Background: Electronic Health Records hold detailed longitudinal information about each patient's health status and general clinical history, a large portion of which is stored within the unstructured text. Existing approaches focus mostly…

Clinical notes contain valuable, context-rich information, but their unstructured format introduces several challenges, including unintended biases (e.g., gender or racial bias), and poor generalization across clinical settings (e.g.,…

计算与语言 · 计算机科学 2025-11-18 Karthikeyan K , Raghuveer Thirukovalluru , David Carlson

While state-of-the-art Text-to-Speech systems can generate natural speech of very high quality at sentence level, they still meet great challenges in speech generation for paragraph / long-form reading. Such deficiencies are due to i)…

计算与语言 · 计算机科学 2023-10-10 Yujia Xiao , Shaofei Zhang , Xi Wang , Xu Tan , Lei He , Sheng Zhao , Frank K. Soong , Tan Lee

Statistical learning with a large number of rare binary features is commonly encountered in analyzing electronic health records (EHR) data, especially in the modeling of disease onset with prior medical diagnoses and procedures. Dealing…

机器学习 · 计算机科学 2024-02-28 Jianmin Chen , Robert H. Aseltine , Fei Wang , Kun Chen

Large-scale pre-trained models (PTMs) such as BERT and GPT have recently achieved great success in Natural Language Processing and Computer Vision domains. However, the development of PTMs on healthcare time-series data is lagging…

机器学习 · 计算机科学 2024-09-10 Ziyang Song , Qincheng Lu , Hao Xu , He Zhu , David L. Buckeridge , Yue Li

Model customization necessitates high-quality and diverse datasets, but acquiring such data remains time-consuming and labor-intensive. Despite the great potential of large language models (LLMs) for data synthesis, current approaches are…

机器学习 · 计算机科学 2025-06-24 Sheng Wang , Pengan Chen , Jingqi Zhou , Qintong Li , Jingwei Dong , Jiahui Gao , Boyang Xue , Jiyue Jiang , Lingpeng Kong , Chuan Wu

In this paper we study the problem of predicting clinical diagnoses from textual Electronic Health Records (EHR) data. We show the importance of this problem in medical community and present comprehensive historical review of the problem…

计算与语言 · 计算机科学 2020-09-29 Pavel Blinov , Manvel Avetisian , Vladimir Kokh , Dmitry Umerenkov , Alexander Tuzhilin

Research into the classification of time series has made enormous progress in the last decade. The UCR time series archive has played a significant role in challenging and guiding the development of new learners for time series…

The end-to-end TTS, which can predict speech directly from a given sequence of graphemes or phonemes, has shown improved performance over the conventional TTS. However, its predicting capability is still limited by the acoustic/phonetic…

计算与语言 · 计算机科学 2019-04-10 Haohan Guo , Frank K. Soong , Lei He , Lei Xie

The increasing availability of unstructured clinical narratives in electronic health records (EHRs) has created new opportunities for automated disease characterization, cohort identification, and clinical decision support. However,…

计算与语言 · 计算机科学 2026-03-03 Fariba Afrin Irany , Sampson Akwafuo

Source code can be parsed into the abstract syntax tree (AST) based on defined syntax rules. However, in pre-training, little work has considered the incorporation of tree structure into the learning process. In this paper, we present…

机器学习 · 计算机科学 2021-07-16 Xue Jiang , Zhuoran Zheng , Chen Lyu , Liang Li , Lei Lyu

Accurate and interpretable predictions of depression severity are essential for clinical decision support, yet existing models often lack uncertainty estimates and temporal modeling. We propose PTTSD, a Probabilistic Textual Time Series…

计算与语言 · 计算机科学 2025-11-07 Fabian Schmidt , Seyedehmoniba Ravan , Vladimir Vlassov

Electronic Health Records (EHRs) contain rich, longitudinal patient information across structured (e.g., labs, vitals, and imaging) and unstructured (e.g., clinical notes) modalities. While deep learning models such as RNNs and Transformers…

机器学习 · 计算机科学 2026-02-18 Mohammad Al Olaimat , Shaika Chowdhury , Serdar Bozdag

Applying methods in natural language processing on electronic health records (EHR) data is a growing field. Existing corpus and annotation focus on modeling textual features and relation prediction. However, there is a paucity of annotated…

计算与语言 · 计算机科学 2022-04-08 Yanjun Gao , Dmitriy Dligach , Timothy Miller , Samuel Tesch , Ryan Laffin , Matthew M. Churpek , Majid Afshar