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Graph representation learning has attracted a surge of interest recently, whose target at learning discriminant embedding for each node in the graph. Most of these representation methods focus on supervised learning and heavily depend on…

机器学习 · 计算机科学 2021-07-07 Pengpeng Shao , Tong Liu , Dawei Zhang , Jianhua Tao , Feihu Che , Guohua Yang

Graph Neural Networks usually rely on the assumption that the graph topology is available to the network as well as optimal for the downstream task. Latent graph inference allows models to dynamically learn the intrinsic graph structure of…

机器学习 · 计算机科学 2023-06-28 Haitz Sáez de Ocáriz Borde , Anees Kazi , Federico Barbero , Pietro Liò

Graph autoencoders (GAEs) are powerful tools in representation learning for graph embedding. However, the performance of GAEs is very dependent on the quality of the graph structure, i.e., of the adjacency matrix. In other words, GAEs would…

机器学习 · 计算机科学 2021-03-24 Rui Zhang , Yunxing Zhang , Xuelong Li

Graph machine learning, particularly using graph neural networks, heavily relies on node features. However, many real-world systems, such as social and biological networks, lack node features due to privacy concerns, incomplete data, or…

机器学习 · 计算机科学 2025-06-10 Anwar Said , Waseem Abbas , Xenofon Koutsoukos

The autoencoder model uses an encoder to map data samples to a lower dimensional latent space and then a decoder to map the latent space representations back to the data space. Implicitly, it relies on the encoder to approximate the inverse…

机器学习 · 统计学 2021-05-12 Kyriakos Flouris , Anna Volokitin , Gustav Bredell , Ender Konukoglu

Non-parallel text style transfer has attracted increasing research interests in recent years. Despite successes in transferring the style based on the encoder-decoder framework, current approaches still lack the ability to preserve the…

计算与语言 · 计算机科学 2021-02-02 Yukai Shi , Sen Zhang , Chenxing Zhou , Xiaodan Liang , Xiaojun Yang , Liang Lin

Vision Transformers (ViTs) have emerged as popular models in computer vision, demonstrating state-of-the-art performance across various tasks. This success typically follows a two-stage strategy involving pre-training on large-scale…

计算机视觉与模式识别 · 计算机科学 2024-02-07 Zijun Long , Zaiqiao Meng , Gerardo Aragon Camarasa , Richard McCreadie

There has been a growing excitement that implicit graph generative models could be used to design or discover new molecules for medicine or material design. Because these molecules have not been discovered, they naturally lie in unexplored…

机器学习 · 计算机科学 2024-11-21 Mai Elkady , Thu Bui , Bruno Ribeiro , David I. Inouye

Learning representations on large-sized graphs is a long-standing challenge due to the inter-dependence nature involved in massive data points. Transformers, as an emerging class of foundation encoders for graph-structured data, have shown…

机器学习 · 计算机科学 2024-08-19 Qitian Wu , Wentao Zhao , Chenxiao Yang , Hengrui Zhang , Fan Nie , Haitian Jiang , Yatao Bian , Junchi Yan

Generating graph structures is a challenging problem due to the diverse representations and complex dependencies among nodes. In this paper, we introduce Graph Variational Recurrent Neural Network (GraphVRNN), a probabilistic autoregressive…

机器学习 · 计算机科学 2019-10-07 Shih-Yang Su , Hossein Hajimirsadeghi , Greg Mori

Most existing feature learning methods optimize inflexible handcrafted features and the affinity matrix is constructed by shallow linear embedding methods. Different from these conventional methods, we pretrain a generative neural network…

计算机视觉与模式识别 · 计算机科学 2019-10-02 Changlu Chen , Chaoxi Niu , Xia Zhan , Kun Zhan

Graph machine learning architectures are typically tailored to specific tasks on specific datasets, which hinders their broader applicability. This has led to a new quest in graph machine learning: how to build graph foundation models…

机器学习 · 计算机科学 2025-10-29 Ben Finkelshtein , İsmail İlkan Ceylan , Michael Bronstein , Ron Levie

Graph Neural Networks (GNNs) are recently proposed neural network structures for the processing of graph-structured data. Due to their employed neighbor aggregation strategy, existing GNNs focus on capturing node-level information and…

机器学习 · 计算机科学 2022-01-05 Xing Ai , Chengyu Sun , Zhihong Zhang , Edwin R Hancock

The integration of deep learning approaches in biomedical research has been transformative, enabling breakthroughs in various applications. Despite these strides, its application in protein inference is impeded by the scarcity of…

机器学习 · 计算机科学 2026-05-07 Zheng Ma , Jiazhen Chen , Lei Xin , Ali Ghodsi

Recent advances in artificial intelligence have propelled the development of innovative computational materials modeling and design techniques. Generative deep learning models have been used for molecular representation, discovery, and…

化学物理 · 物理学 2021-02-12 Navid Shervani-Tabar , Nicholas Zabaras

The ability to discover meaningful, accurate, and concise mathematical equations that describe datasets is valuable across various domains. Equations offer explicit relationships between variables, enabling deeper insights into underlying…

机器学习 · 计算机科学 2025-04-01 Nisal Ranasinghe , Damith Senanayake , Saman Halgamuge

Recent papers have formulated the problem of learning graphs from data as an inverse covariance estimation with graph Laplacian constraints. While such problems are convex, existing methods cannot guarantee that solutions will have specific…

机器学习 · 统计学 2018-05-09 Eduardo Pavez , Hilmi E. Egilmez , Antonio Ortega

Graph Neural Networks (GNNs) have received increasing attention in many fields. However, due to the lack of prior graphs, their use for semantic labeling has been limited. Here, we propose a novel architecture called the Self-Constructing…

计算机视觉与模式识别 · 计算机科学 2020-04-24 Qinghui Liu , Michael Kampffmeyer , Robert Jenssen , Arnt-Børre Salberg

We present the Topology Transformation Equivariant Representation learning, a general paradigm of self-supervised learning for node representations of graph data to enable the wide applicability of Graph Convolutional Neural Networks…

机器学习 · 计算机科学 2021-12-03 Xiang Gao , Wei Hu , Guo-Jun Qi

In the quest of accurate vertex classification, we introduce GRAVITY (Graph-based Representation leArning via Vertices Interaction TopologY), a framework inspired by physical systems where objects self-organize under attractive forces.…

机器学习 · 计算机科学 2025-08-13 Etienne Gael Tajeuna , Jean Marie Tshimula