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Knowledge graph completion (KGC) aims to predict missing facts in knowledge graphs (KGs), which is crucial as modern KGs remain largely incomplete. While training KGC models on multiple aligned KGs can improve performance, previous methods…

计算与语言 · 计算机科学 2023-12-19 Wei Tang , Zhiqian Wu , Yixin Cao , Yong Liao , Pengyuan Zhou

A knowledge graph (KG) consists of a set of interconnected typed entities and their attributes. Recently, KGs are popularly used as the auxiliary information to enable more accurate, explainable, and diverse user preference recommendations.…

信息检索 · 计算机科学 2022-04-19 Yuntao Du , Xinjun Zhu , Lu Chen , Ziquan Fang , Yunjun Gao

In the investment industry, it is often essential to carry out fine-grained company similarity quantification for a range of purposes, including market mapping, competitor analysis, and mergers and acquisitions. We propose and publish a…

Graph contrastive learning (GCL) has emerged as a state-of-the-art strategy for learning representations of diverse graphs including social and biomedical networks. GCL widely uses stochastic graph topology augmentation, such as uniform…

机器学习 · 计算机科学 2024-02-22 Yucheng Wu , Leye Wang , Xiao Han , Han-Jia Ye

Continual Knowledge Graph Embedding (CKGE) seeks to integrate new knowledge while preserving past information. However, existing methods struggle with efficiency and scalability due to two key limitations: (1) suboptimal knowledge…

计算与语言 · 计算机科学 2025-06-11 Lijing Zhu , Qizhen Lan , Qing Tian , Wenbo Sun , Li Yang , Lu Xia , Yixin Xie , Xi Xiao , Tiehang Duan , Cui Tao , Shuteng Niu

Large language models (LLMs) are rapidly transforming various domains, including biomedicine and healthcare, and demonstrate remarkable potential from scientific research to new drug discovery. Graph-based retrieval-augmented generation…

定量方法 · 定量生物学 2025-11-14 Guofeng Meng , Li Shen , Qiuyan Zhong , Wei Wang , Haizhou Zhang , Xiaozhen Wang

Biomedical information graphs are crucial for interaction discovering of biomedical information in modern age, such as identification of multifarious molecular interactions and drug discovery, which attracts increasing interests in…

机器学习 · 计算机科学 2024-02-20 Zecheng Yin

Federated Graph Learning (FGL) has garnered widespread attention by enabling collaborative training on multiple clients for semi-supervised classification tasks. However, most existing FGL studies do not well consider the missing…

机器学习 · 计算机科学 2024-07-17 Luying Zhong , Yueyang Pi , Zheyi Chen , Zhengxin Yu , Wang Miao , Xing Chen , Geyong Min

Electrocardiogram (ECG) detection and delineation are key steps for numerous tasks in clinical practice, as ECG is the most performed non-invasive test for assessing cardiac condition. State-of-the-art algorithms employ digital signal…

机器学习 · 计算机科学 2020-05-12 Guillermo Jimenez-Perez , Alejandro Alcaine , Oscar Camara

In federated graph learning (FGL), a complete graph is divided into multiple subgraphs stored in each client due to privacy concerns, and all clients jointly train a global graph model by only transmitting model parameters. A pain point of…

机器学习 · 计算机科学 2025-03-26 Bo Yan , Zhongjian Zhang , Huabin Sun , Mengmei Zhang , Yang Cao , Chuan Shi

Federated graph learning (FGL) is a promising distributed training paradigm for graph neural networks across multiple local systems without direct data sharing. This approach inherently involves large-scale distributed graph processing,…

机器学习 · 计算机科学 2025-01-22 Xunkai Li , Yinlin Zhu , Boyang Pang , Guochen Yan , Yeyu Yan , Zening Li , Zhengyu Wu , Wentao Zhang , Rong-Hua Li , Guoren Wang

Real-world multimodal knowledge graphs (MKGs) are inherently heterogeneous, modeling entities that are associated with diverse modalities. Traditional knowledge graph embedding (KGE) methods excel at learning continuous representations of…

人工智能 · 计算机科学 2026-03-16 Athanasios Efthymiou , Stevan Rudinac , Monika Kackovic , Nachoem Wijnberg , Marcel Worring

Retrieval augmented generation (RAG) has shown great power in improving Large Language Models (LLMs). However, most existing RAG-based LLMs are dedicated to retrieving single modality information, mainly text; while for many real-world…

计算与语言 · 计算机科学 2025-06-09 Saptarshi Sengupta , Shuhua Yang , Paul Kwong Yu , Fali Wang , Suhang Wang

The integration of multimodal Electronic Health Records (EHR) data has significantly advanced clinical predictive capabilities. Existing models, which utilize clinical notes and multivariate time-series EHR data, often fall short of…

计算与语言 · 计算机科学 2025-02-27 Yinghao Zhu , Changyu Ren , Zixiang Wang , Xiaochen Zheng , Shiyun Xie , Junlan Feng , Xi Zhu , Zhoujun Li , Liantao Ma , Chengwei Pan

The large-scale development of large language models (LLMs) in medical contexts, such as diagnostic assistance and treatment recommendations, necessitates that these models possess accurate medical knowledge and deliver traceable…

人工智能 · 计算机科学 2025-08-12 Qiyuan Li , Haijiang Liu , Caicai Guo , Chao Gao , Deyu Chen , Meng Wang , Feng Gao , Frank van Harmelen , Jinguang Gu

Biomedical knowledge graphs (BioMedKGs) are essential infrastructures for biomedical and healthcare big data and artificial intelligence (AI), facilitating natural language processing, model development, and data exchange. For decades,…

Representation learning provides new and powerful graph analytical approaches and tools for the highly valued data science challenge of mining knowledge graphs. Since previous graph analytical methods have mostly focused on homogeneous…

Recent years have seen a rapid growth of utilizing graph neural networks (GNNs) in the biomedical domain for tackling drug-related problems. However, like any other deep architectures, GNNs are data hungry. While requiring labels in real…

生物物理 · 物理学 2022-05-03 Mengying Sun , Jing Xing , Huijun Wang , Bin Chen , Jiayu Zhou

The increasing need for accurate and unified analysis of diverse biological signals, such as ECG and EEG, is paramount for comprehensive patient assessment, especially in synchronous monitoring. Despite advances in multi-sensor fusion, a…

信号处理 · 电气工程与系统科学 2025-07-18 Mohammed Guhdar , Ramadhan J. Mstafa , Abdulhakeem O. Mohammed

Dynamic graphs arise in various real-world applications, and it is often welcomed to model the dynamics directly in continuous time domain for its flexibility. This paper aims to design an easy-to-use pipeline (termed as EasyDGL which is…

机器学习 · 计算机科学 2024-08-20 Chao Chen , Haoyu Geng , Nianzu Yang , Xiaokang Yang , Junchi Yan